RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 JKAMPQ9P055 326 aa15.49■□□□□ 0.07
HMG20B-213ENST00000488973 K7EQM0 130 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 COX8AP10176 69 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 LOXP28300 417 aaPredicted RBP15.48■□□□□ 0.07
HMG20B-213ENST00000488973 LYZP61626 148 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 TMEM155Q4W5P6 130 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 EXOC3-AS1Q8N2X6 119 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 IGHV3-72A0A0B4J1Y9 119 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 CSN3P07498 182 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 IGHV1-8P0DP01 117 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 GPR183P32249 361 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 SPATA25Q9BR10 227 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 MCRIP2Q9BUT9 160 aaKnown RBP15.48■□□□□ 0.07
HMG20B-213ENST00000488973 ZNF747Q9BV97 191 aa15.48■□□□□ 0.07
HMG20B-213ENST00000488973 ZNF785A8K8V0 405 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 H0Y8G0 127 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 H3BRM9 83 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 J3KRW8 73 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 CCDC144NLQ6NUI1 221 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 TMEM75Q8N9X5 138 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 OR2K2Q8NGT1 345 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 SRSF12Q8WXF0 261 aaKnown RBP15.47■□□□□ 0.07
HMG20B-213ENST00000488973 CTSZQ9UBR2 303 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 SIGLEC9Q9Y336 463 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 A0A087X0K7 114 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 ARMS2P0C7Q2 107 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 APELAP0DMC3 54 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 CSN1S1P47710 185 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 ZC2HC1AQ96GY0 325 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 ZFHX4Q86UP3 3567 aa15.47■□□□□ 0.07
HMG20B-213ENST00000488973 IGFL3Q6UXB1 125 aa15.46■□□□□ 0.07
HMG20B-213ENST00000488973 CCL17Q92583 94 aa15.46■□□□□ 0.07
HMG20B-213ENST00000488973 TMEM133Q9H2Q1 129 aa15.46■□□□□ 0.07
HMG20B-213ENST00000488973 MALRD1Q5VYJ5 2156 aa15.46■□□□□ 0.07
HMG20B-213ENST00000488973 OR10AG1Q8NH19 301 aa15.46■□□□□ 0.07
HMG20B-213ENST00000488973 KAAG1Q9UBP8 84 aa15.46■□□□□ 0.07
HMG20B-213ENST00000488973 TEX22C9J3V5 150 aa15.45■□□□□ 0.06
HMG20B-213ENST00000488973 CNTFRP26992 372 aa15.45■□□□□ 0.06
HMG20B-213ENST00000488973 Q6AWC8 147 aa15.45■□□□□ 0.06
HMG20B-213ENST00000488973 DPF1Q92782 380 aa15.45■□□□□ 0.06
HMG20B-213ENST00000488973 CUL9Q8IWT3 2517 aa15.45■□□□□ 0.06
HMG20B-213ENST00000488973 C2orf91Q6ZV80 131 aa15.45■□□□□ 0.06
HMG20B-213ENST00000488973 FA2HQ7L5A8 372 aa15.45■□□□□ 0.06
HMG20B-213ENST00000488973 RASL11BQ9BPW5 248 aa15.45■□□□□ 0.06
HMG20B-213ENST00000488973 Q71RC1 249 aaPredicted RBP15.44■□□□□ 0.06
HMG20B-213ENST00000488973 PPP1R27Q86WC6 154 aa15.44■□□□□ 0.06
HMG20B-213ENST00000488973 BPIFA4PQ86YQ2 179 aa15.44■□□□□ 0.06
HMG20B-213ENST00000488973 SCNM1Q9BWG6 230 aa15.44■□□□□ 0.06
HMG20B-213ENST00000488973 NGBQ9NPG2 151 aa15.44■□□□□ 0.06
HMG20B-213ENST00000488973 ZNF292O60281 2723 aa15.44■□□□□ 0.06
HMG20B-213ENST00000488973 TRBV19A0A075B6N1 114 aa15.44■□□□□ 0.06
HMG20B-213ENST00000488973 PRSS3P2Q8NHM4 247 aa15.44■□□□□ 0.06
HMG20B-213ENST00000488973 I3L2K1 104 aa15.43■□□□□ 0.06
HMG20B-213ENST00000488973 J3QR89 54 aa15.43■□□□□ 0.06
HMG20B-213ENST00000488973 LYPD1Q8N2G4 141 aa15.43■□□□□ 0.06
HMG20B-213ENST00000488973 COL25A1Q9BXS0 654 aaPredicted RBP15.43■□□□□ 0.06
HMG20B-213ENST00000488973 TIMM8BQ9Y5J9 83 aaPredicted RBP15.43■□□□□ 0.06
HMG20B-213ENST00000488973 ZNF207O43670 478 aaKnown RBP15.43■□□□□ 0.06
HMG20B-213ENST00000488973 PSG8Q9UQ74 426 aa15.43■□□□□ 0.06
HMG20B-213ENST00000488973 ZNF493Q6ZR52 646 aa15.42■□□□□ 0.06
HMG20B-213ENST00000488973 Q6ZS92 163 aa15.42■□□□□ 0.06
HMG20B-213ENST00000488973 JMJD8Q96S16 334 aa15.42■□□□□ 0.06
HMG20B-213ENST00000488973 SHANK2-AS3Q9BTD1 123 aa15.42■□□□□ 0.06
HMG20B-213ENST00000488973 TSSC4Q9Y5U2 329 aaPredicted RBP15.42■□□□□ 0.06
HMG20B-213ENST00000488973 TEX48A0A1B0GUV7 120 aa15.42■□□□□ 0.06
HMG20B-213ENST00000488973 RBP4P02753 201 aa15.42■□□□□ 0.06
HMG20B-213ENST00000488973 FOXI2Q6ZQN5 318 aa15.42■□□□□ 0.06
HMG20B-213ENST00000488973 FAM110AQ9BQ89 295 aa15.42■□□□□ 0.06
HMG20B-213ENST00000488973 C16orf97H3BN30 126 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 BSPH1Q075Z2 132 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 SIGLEC15Q6ZMC9 328 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 FAM57AQ8TBR7 257 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 INSIG2Q9Y5U4 225 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 A6NDN8 102 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 NCR2O95944 276 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 IGKV1-17P01599 117 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 IGLV1-47P01700 117 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 TMEM97Q5BJF2 176 aa15.41■□□□□ 0.06
HMG20B-213ENST00000488973 CNOT1A5YKK6 2376 aaKnown RBP15.4■□□□□ 0.06
HMG20B-213ENST00000488973 IGHV1-3A0A0C4DH29 117 aa15.4■□□□□ 0.06
HMG20B-213ENST00000488973 H3BRN7 92 aa15.4■□□□□ 0.06
HMG20B-213ENST00000488973 CRIP1P50238 77 aa15.4■□□□□ 0.06
HMG20B-213ENST00000488973 RPL24P83731 157 aaKnown RBP15.4■□□□□ 0.06
HMG20B-213ENST00000488973 ABCA1O95477 2261 aa15.4■□□□□ 0.06
HMG20B-213ENST00000488973 C17orf77Q96MU5 243 aa15.39■□□□□ 0.05
HMG20B-213ENST00000488973 K7EM74 188 aa15.39■□□□□ 0.05
HMG20B-213ENST00000488973 SRSF8Q9BRL6 282 aaKnown RBP15.39■□□□□ 0.05
HMG20B-213ENST00000488973 MRPL16Q9NX20 251 aaKnown RBP15.39■□□□□ 0.05
HMG20B-213ENST00000488973 DMXL1Q9Y485 3027 aa15.39■□□□□ 0.05
HMG20B-213ENST00000488973 SMG1Q96Q15 3661 aaKnown RBP15.38■□□□□ 0.05
HMG20B-213ENST00000488973 A0A096LNJ9 63 aa15.38■□□□□ 0.05
HMG20B-213ENST00000488973 H3BUT2 72 aa15.38■□□□□ 0.05
HMG20B-213ENST00000488973 KLK10O43240 276 aa15.38■□□□□ 0.05
HMG20B-213ENST00000488973 FGF6P10767 208 aa15.38■□□□□ 0.05
HMG20B-213ENST00000488973 IFI27P40305 119 aaPredicted RBP15.38■□□□□ 0.05
HMG20B-213ENST00000488973 U3KQK5 164 aa15.38■□□□□ 0.05
HMG20B-213ENST00000488973 ASPMQ8IZT6 3477 aa15.38■□□□□ 0.05
HMG20B-213ENST00000488973 A0A0G2JLM5 398 aa15.38■□□□□ 0.05
HMG20B-213ENST00000488973 RNASE6Q93091 150 aaKnown RBP15.38■□□□□ 0.05
HMG20B-213ENST00000488973 FBXL15Q9H469 300 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms