RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SLC25A21Q9BQT8 299 aaPredicted RBP0.63□□□□□ -2.31
CD46-215ENST00000488596 DDA1Q9BW61 102 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 RTL8AQ9BWD3 113 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 NPCDR1Q9BY65 106 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 MED11Q9P086 117 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 OR52A1Q9UKL2 312 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 CHCHD2Q9Y6H1 151 aaPredicted RBP0.63□□□□□ -2.31
CD46-215ENST00000488596 XIRP1Q702N8 1843 aaKnown RBP0.63□□□□□ -2.31
CD46-215ENST00000488596 CASP8AP2Q9UKL3 1982 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 FRMPD1Q5SYB0 1578 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 TRBV6-4A0A1B0GX49 114 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 TRDV1A0A1B0GX56 115 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 TCRBV4S1A1TA0A5B7 111 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 A8MWV9 139 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 B4DSR2 109 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 E7EQ34 232 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 TSTD3H0UI37 97 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 K7ERJ3 54 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 CCL16O15467 120 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 PIAS1O75925 651 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 DHFRP00374 187 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 CXCL1P09341 107 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 TMBIM6P55061 237 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 ARPP19P56211 112 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 RTL8BQ17RB0 113 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 FKBP1CQ5VVH2 108 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 C1orf140Q5VVS0 124 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 EIF5AL1Q6IS14 154 aaKnown RBP0.62□□□□□ -2.31
CD46-215ENST00000488596 TAC4Q86UU9 113 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 NUP35Q8NFH5 326 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 C4orf3Q8WVX3 66 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 TEX37Q96LM6 180 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 POPDC3Q9HBV1 291 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 NDUFAF1Q9Y375 327 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 ZFC3H1O60293 1989 aaKnown RBP0.62□□□□□ -2.31
CD46-215ENST00000488596 EML5Q05BV3 1969 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 UNC13CQ8NB66 2214 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 FER1L6Q2WGJ9 1857 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 NISCHQ9Y2I1 1504 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 ALPK3Q96L96 1907 aa0.62□□□□□ -2.31
CD46-215ENST00000488596 COL1A1P02452 1464 aaPredicted RBP0.61□□□□□ -2.31
CD46-215ENST00000488596 PHRF1Q9P1Y6 1649 aaKnown RBP0.61□□□□□ -2.31
CD46-215ENST00000488596 CHD3Q12873 2000 aaKnown RBP0.61□□□□□ -2.31
CD46-215ENST00000488596 TRAV5A0A0B4J249 113 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 A0A1W2PRE2 83 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 NCR3O14931 201 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 HIST1H2BKO60814 126 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 KLF7O75840 302 aaPredicted RBP0.61□□□□□ -2.31
CD46-215ENST00000488596 FAM107AO95990 144 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 IFNA4P05014 189 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 HIST1H2BJP06899 126 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 HLA-EP13747 358 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 S100GP29377 79 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 ROMO1P60602 79 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 MSMO1Q15800 293 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 SAMD13Q5VXD3 122 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 TOMM20LQ6UXN7 152 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 PATE2Q6UY27 113 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 ANGPTL5Q86XS5 388 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 PRR15Q8IV56 129 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 Q8N6K4 173 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 OR5D14Q8NGL3 314 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 GRPEL2Q8TAA5 225 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 BORCS8Q96FH0 119 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 RMND5BQ96G75 393 aaPredicted RBP0.61□□□□□ -2.31
CD46-215ENST00000488596 ZNF714Q96N38 554 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 EFCAB11Q9BUY7 163 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 CCDC32Q9BV29 185 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 OR2H1Q9GZK4 316 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 LAMTOR3Q9UHA4 124 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 LY96Q9Y6Y9 160 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 TNS3Q68CZ2 1445 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 TRAPPC8Q9Y2L5 1435 aa0.61□□□□□ -2.31
CD46-215ENST00000488596 TCOF1Q13428 1488 aaKnown RBP0.61□□□□□ -2.31
CD46-215ENST00000488596 MUC4Q99102 2169 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 SIP14410 1827 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 KIAA1549Q9HCM3 1950 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 PRORSD1PA6NEY8 169 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 C17orf112F2Z3M2 114 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 H3BQV1 296 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 GABARAPH6UMI1 98 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 H7BYZ3 331 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 CST7O76096 145 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 FREM3P0C091 2139 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 BCL2P10415 239 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 RPL35P42766 123 aaKnown RBP0.6□□□□□ -2.31
CD46-215ENST00000488596 HBBP68871 147 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 KLRD1Q13241 179 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 TMEM128Q5BJH2 165 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 C2orf82Q6UX34 121 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 C4orf22Q6V702 233 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 OR5D16Q8NGK9 328 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 OR4K15Q8NH41 348 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 THEM6Q8WUY1 208 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 SKA2Q8WVK7 121 aaPredicted RBP0.6□□□□□ -2.31
CD46-215ENST00000488596 POP5Q969H6 163 aaKnown RBP0.6□□□□□ -2.31
CD46-215ENST00000488596 ISOC1Q96CN7 298 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 MUCL1Q96DR8 90 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 CACYBPQ9HB71 228 aaKnown RBP0.6□□□□□ -2.31
CD46-215ENST00000488596 OTORQ9NRC9 128 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms