RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CCDC59Q9P031 241 aaKnown RBP13.22□□□□□ -0.29
GGPS1-206ENST00000488594 H3BNG1 76 aa13.21□□□□□ -0.29
GGPS1-206ENST00000488594 OR5G3P0C626 314 aa13.21□□□□□ -0.29
GGPS1-206ENST00000488594 LINC00612Q8N6U2 182 aa13.21□□□□□ -0.29
GGPS1-206ENST00000488594 RPUSD4Q96CM3 377 aaKnown RBP13.21□□□□□ -0.29
GGPS1-206ENST00000488594 SMCO3A2RU48 225 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 H3BP45 60 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 LINC00869P0C866 280 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 CXCL2P19875 107 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 KRTAP10-2P60368 255 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 CCDC28AQ8IWP9 274 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 FABP12A6NFH5 140 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-206ENST00000488594 AP3S2P59780 193 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 DYNC2LI1Q8TCX1 351 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 UHRF2Q96PU4 802 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 SOSTQ9BQB4 213 aa13.2□□□□□ -0.3
GGPS1-206ENST00000488594 SLC25A21Q9BQT8 299 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-206ENST00000488594 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
GGPS1-206ENST00000488594 SFT2D2O95562 160 aa13.19□□□□□ -0.3
GGPS1-206ENST00000488594 RLN2P04090 185 aa13.19□□□□□ -0.3
GGPS1-206ENST00000488594 ESRGQ1W209 222 aa13.19□□□□□ -0.3
GGPS1-206ENST00000488594 A0A0J9YY99 117 aa13.18□□□□□ -0.3
GGPS1-206ENST00000488594 HOXB5P09067 269 aa13.18□□□□□ -0.3
GGPS1-206ENST00000488594 ANXA7P20073 488 aaKnown RBP13.18□□□□□ -0.3
GGPS1-206ENST00000488594 LCN15Q6UWW0 184 aa13.18□□□□□ -0.3
GGPS1-206ENST00000488594 RAB2BQ8WUD1 216 aa13.18□□□□□ -0.3
GGPS1-206ENST00000488594 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
GGPS1-206ENST00000488594 MRPS26Q9BYN8 205 aaKnown RBP13.18□□□□□ -0.3
GGPS1-206ENST00000488594 APOBP04114 4563 aaKnown RBP13.17□□□□□ -0.3
GGPS1-206ENST00000488594 PMS2P5A8MQ11 134 aa13.17□□□□□ -0.3
GGPS1-206ENST00000488594 EPM2AB3EWF7 344 aa13.17□□□□□ -0.3
GGPS1-206ENST00000488594 K7EPK0 472 aa13.17□□□□□ -0.3
GGPS1-206ENST00000488594 HOXA5P20719 270 aa13.17□□□□□ -0.3
GGPS1-206ENST00000488594 ID3Q02535 119 aa13.17□□□□□ -0.3
GGPS1-206ENST00000488594 PPP1R1AQ13522 171 aa13.17□□□□□ -0.3
GGPS1-206ENST00000488594 PXDC1Q5TGL8 231 aa13.17□□□□□ -0.3
GGPS1-206ENST00000488594 BCL7BQ9BQE9 202 aa13.17□□□□□ -0.3
GGPS1-206ENST00000488594 ZNF331Q9NQX6 463 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-206ENST00000488594 GAGE12BA1L429 117 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 SNURFLB1AK76 121 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 MRPS12O15235 138 aaKnown RBP13.16□□□□□ -0.3
GGPS1-206ENST00000488594 GAGE7O76087 117 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 GAGE12FP0CL80 117 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 GAGE12GP0CL81 117 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 GAGE12IP0CL82 117 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 TNFSF8P32971 234 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 TOMM5Q8N4H5 51 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 DEDD2Q8WXF8 326 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 ARL6Q9H0F7 186 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 ARV1Q9H2C2 271 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 PSENENQ9NZ42 101 aa13.16□□□□□ -0.3
GGPS1-206ENST00000488594 DNAH5Q8TE73 4624 aa13.15□□□□□ -0.3
GGPS1-206ENST00000488594 FNDC10F2Z333 226 aa13.15□□□□□ -0.3
GGPS1-206ENST00000488594 DLK1P80370 383 aa13.15□□□□□ -0.3
GGPS1-206ENST00000488594 GFI1BQ5VTD9 330 aa13.15□□□□□ -0.3
GGPS1-206ENST00000488594 CCDC190Q86UF4 302 aa13.15□□□□□ -0.3
GGPS1-206ENST00000488594 TRIM63Q969Q1 353 aa13.15□□□□□ -0.3
GGPS1-206ENST00000488594 NPVFQ9HCQ7 196 aa13.15□□□□□ -0.3
GGPS1-206ENST00000488594 ZNF586Q9NXT0 402 aa13.15□□□□□ -0.3
GGPS1-206ENST00000488594 PTTG2Q9NZH5 202 aa13.15□□□□□ -0.3
GGPS1-206ENST00000488594 TMBIM6P55061 237 aa13.14□□□□□ -0.31
GGPS1-206ENST00000488594 POLR2GP62487 172 aaKnown RBP eCLIP13.14□□□□□ -0.31
GGPS1-206ENST00000488594 PATE2Q6UY27 113 aa13.14□□□□□ -0.31
GGPS1-206ENST00000488594 SLIRPQ9GZT3 109 aaKnown RBP13.14□□□□□ -0.31
GGPS1-206ENST00000488594 PGPEP1Q9NXJ5 209 aa13.14□□□□□ -0.31
GGPS1-206ENST00000488594 DAZ2Q13117 558 aaKnown RBP13.13□□□□□ -0.31
GGPS1-206ENST00000488594 KIR3DS1Q14943 382 aa13.13□□□□□ -0.31
GGPS1-206ENST00000488594 C4orf46Q504U0 113 aa13.13□□□□□ -0.31
GGPS1-206ENST00000488594 TEPPQ6URK8 271 aa13.13□□□□□ -0.31
GGPS1-206ENST00000488594 BPIFA4PQ86YQ2 179 aa13.13□□□□□ -0.31
GGPS1-206ENST00000488594 MCFD2Q8NI22 146 aa13.13□□□□□ -0.31
GGPS1-206ENST00000488594 SMIM8Q96KF7 97 aa13.13□□□□□ -0.31
GGPS1-206ENST00000488594 PRB4P10163 310 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-206ENST00000488594 LINC00315P59091 139 aa13.12□□□□□ -0.31
GGPS1-206ENST00000488594 UBE2MP61081 183 aaKnown RBP13.12□□□□□ -0.31
GGPS1-206ENST00000488594 RRAS2P62070 204 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-206ENST00000488594 LINC00305Q7Z4B0 112 aa13.12□□□□□ -0.31
GGPS1-206ENST00000488594 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
GGPS1-206ENST00000488594 OR10P1Q8NGE3 313 aa13.12□□□□□ -0.31
GGPS1-206ENST00000488594 ODF3Q96PU9 254 aa13.12□□□□□ -0.31
GGPS1-206ENST00000488594 PYGO2Q9BRQ0 406 aa13.12□□□□□ -0.31
GGPS1-206ENST00000488594 MGAT4CQ9UBM8 478 aa13.12□□□□□ -0.31
GGPS1-206ENST00000488594 GOSR2O14653 212 aa13.11□□□□□ -0.31
GGPS1-206ENST00000488594 EREGO14944 169 aa13.11□□□□□ -0.31
GGPS1-206ENST00000488594 SSSCA1O60232 199 aa13.11□□□□□ -0.31
GGPS1-206ENST00000488594 SLC38A11Q08AI6 406 aa13.11□□□□□ -0.31
GGPS1-206ENST00000488594 PYDC2Q56P42 97 aa13.11□□□□□ -0.31
GGPS1-206ENST00000488594 CDPF1Q6NVV7 123 aa13.11□□□□□ -0.31
GGPS1-206ENST00000488594 TMEM14EPQ6UXP3 125 aa13.11□□□□□ -0.31
GGPS1-206ENST00000488594 PARD6GQ9BYG4 376 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-206ENST00000488594 TMPRSS5Q9H3S3 457 aa13.11□□□□□ -0.31
GGPS1-206ENST00000488594 PXMP4Q9Y6I8 212 aa13.11□□□□□ -0.31
GGPS1-206ENST00000488594 LEPP41159 167 aa13.1□□□□□ -0.31
GGPS1-206ENST00000488594 Q6ZRN7 208 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-206ENST00000488594 C18orf15Q96N68 181 aa13.1□□□□□ -0.31
GGPS1-206ENST00000488594 A0A096LPF7 62 aa13.09□□□□□ -0.31
GGPS1-206ENST00000488594 PRAC2D3DTV9 90 aa13.09□□□□□ -0.31
GGPS1-206ENST00000488594 METTL15P1P0C7V9 234 aa13.09□□□□□ -0.31
GGPS1-206ENST00000488594 Q6ZTI0 123 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms