RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 EIF3GO75821 320 aaKnown RBP eCLIP8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 IGLC2P0DOY2 106 aa8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 PYYP10082 97 aa8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 RPL11P62913 178 aaKnown RBP8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 LINC00482Q8N8I6 264 aa8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 FXYD5Q96DB9 178 aa8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
HLA-DMB-261ENST00000487996 A0A1W2PRE2 83 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 RAB19A4D1S5 217 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 LINC00862A6NCI5 91 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 MRPS12O15235 138 aaKnown RBP8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 CSN3P07498 182 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 BCL2P10415 239 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 PAFAH1B2P68402 229 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 PSG9Q00887 426 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 TCF24Q7RTU0 167 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 LYPD1Q8N2G4 141 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 SLC50A1Q9BRV3 221 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 MCRIP2Q9BUT9 160 aaKnown RBP8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 SMDT1Q9H4I9 107 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 CLEC5AQ9NY25 188 aa8.01□□□□□ -1.13
HLA-DMB-261ENST00000487996 TRBV19A0A075B6N1 114 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 INSL3P51460 131 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 CCL20P78556 96 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 RBPMS2Q6ZRY4 209 aaKnown RBP8□□□□□ -1.13
HLA-DMB-261ENST00000487996 BLNKQ8WV28 456 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 TCEAL7Q9BRU2 100 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 EIF5A2Q9GZV4 153 aaKnown RBP8□□□□□ -1.13
HLA-DMB-261ENST00000487996 TMPRSS5Q9H3S3 457 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 AAMDCQ9H7C9 122 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 NRN1Q9NPD7 142 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 VAX2Q9UIW0 290 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 TRAV25A0A0B4J276 109 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 RBFOX3A6NFN3 312 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 SAP30O75446 220 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 PEA15Q15121 130 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 CST9LP1Q5W188 147 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 OR2K2Q8NGT1 345 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 ZNF586Q9NXT0 402 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 MLXQ9UH92 298 aa8□□□□□ -1.13
HLA-DMB-261ENST00000487996 H3BQ15 152 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 PAGE4O60829 102 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 NDUFS6O75380 124 aaKnown RBP7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 CD33P20138 364 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 UBE2G2P60604 165 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 MEF2BQ02080 365 aaPredicted RBP7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 HAGHQ16775 308 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 TOR2AQ5JU69 321 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 ZNF506Q5JVG8 444 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 FAM90A2PQ658T7 463 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 UQCC3Q6UW78 93 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 LINC00469Q8N7U9 141 aa7.99□□□□□ -1.13
HLA-DMB-261ENST00000487996 TRAV2A0A0B4J234 112 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 LOC102723971A0A1B0GUV8 181 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 FAM74A7A6NL05 159 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 C11orf94C9JXX5 98 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 DNASE2O00115 360 aaPredicted RBP7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 ISLRO14498 428 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 TSPAN4O14817 238 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 PDE6DO43924 150 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 ID1P41134 155 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 RANP62826 216 aaKnown RBP7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 DEFB114Q30KQ6 69 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 COMMD7Q86VX2 200 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 EIF4E3Q8N5X7 224 aaKnown RBP7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 CMTM2Q8TAZ6 248 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 GPR61Q9BZJ8 451 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 OTORQ9NRC9 128 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 SMAD5-AS1Q9Y6J3 95 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 F6UZH7 168 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 EDN2P20800 178 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 C9orf66Q5T8R8 295 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 LCN12Q6JVE5 192 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 ADAMTSL5Q6ZMM2 481 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 ARL6IP6Q8N6S5 226 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 RXFP4Q8TDU9 374 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 C16orf92Q96LL3 132 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 SPAG8Q99932 426 aaPredicted RBP7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 Q9H3A6 140 aa7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 ZNF331Q9NQX6 463 aaPredicted RBP7.98□□□□□ -1.13
HLA-DMB-261ENST00000487996 OR4C46A6NHA9 309 aa7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 NDUFB4O95168 129 aa7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 CSN1S1P47710 185 aa7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 SNRPD3P62318 126 aaKnown RBP7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 SUMO1P63165 101 aaKnown RBP7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 C5orf17Q8NAS9 161 aa7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 WFDC9Q8NEX5 89 aa7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 MRPL53Q96EL3 112 aaKnown RBP7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 MS4A6AQ9H2W1 248 aa7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 YTHDF2Q9Y5A9 579 aaKnown RBP7.97□□□□□ -1.13
HLA-DMB-261ENST00000487996 NOTCH3Q9UM47 2321 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 IGKV3-7A0A075B6H7 116 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 SERTM2A0A1B0GWG4 89 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 PGPA6NDG6 321 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 GGTLC3B5MD39 225 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 TMEM250H0YL14 139 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 H3BTX0 84 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 SLC17A3O00476 420 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 IGLV1-51P01701 117 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms