RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SHBGP04278 402 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 CTSDP07339 412 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 PAEPP09466 180 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 MGST1P10620 155 aaKnown RBP1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 RPL22P35268 128 aaKnown RBP1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 NNATQ16517 81 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 ZNF826PQ6ZT77 177 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 MMGT1Q8N4V1 131 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 TEX29Q8N6K0 151 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 FAM216BQ8N7L0 139 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 C3orf56Q8N813 242 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 TSTD1Q8NFU3 115 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR4S1Q8NGB4 309 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR5A2Q8NGI9 324 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 BRK1Q8WUW1 75 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 SMIM3Q9BZL3 60 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 U3KQ87 197 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 CCDC171Q6TFL3 1326 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 RTL9Q8NET4 1388 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 SIPA1L1O43166 1804 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 KIF13BQ9NQT8 1826 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 RALGAPA2Q2PPJ7 1873 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 IGKV1D-42A0A075B6H8 117 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 A0A096LPI6 279 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 TRBV6-5A0A0K0K1A5 114 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 A0A1B0GW64 132 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 C17orf112F2Z3M2 114 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 SMIM24O75264 130 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 UBL3O95164 117 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 MT-ND4LP03901 98 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 TPT1P13693 172 aaKnown RBP1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 MRPS36P82909 103 aaKnown RBP1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 HIST1H1AQ02539 215 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 SPCS2Q15005 226 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 TMEM244Q5VVB8 128 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 RPL13AP3Q6NVV1 102 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 PATE2Q6UY27 113 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 Q6ZRN7 208 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 C7orf65Q6ZTY9 151 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 LRRC18Q8N456 261 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 LINC00301Q8NCQ3 95 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 ZNF418Q8TF45 676 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 C1orf54Q8WWF1 131 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 CHCHD1Q96BP2 118 aaKnown RBP1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 ZC2HC1AQ96GY0 325 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 RETNLBQ9BQ08 111 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 SLC50A1Q9BRV3 221 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 MED9Q9NWA0 146 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 DOCK5Q9H7D0 1870 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 OVOS2A0A0J9YW53 1432 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 OVOS2Q6IE36 1432 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 NCOA3Q9Y6Q9 1424 aa1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 ZFHX2Q9C0A1 2572 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P36-201ENST00000487709 ADGBQ8N7X0 1667 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 TRAV3A0A0B4J244 114 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 TRAV1-1A0A0B4J248 108 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR2T8A6NH00 312 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 K7EP13 123 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR1I1O60431 355 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 ASAH2BP0C7U1 165 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 MIFP14174 115 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 CRYGSP22914 178 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 RAB5CP51148 216 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 MAXP61244 160 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 CDK5R1Q15078 307 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 HSD17B12Q53GQ0 312 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 MORN4Q8NDC4 146 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR2T35Q8NGX2 323 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 NAT14Q8WUY8 206 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 DIRC1Q969H9 104 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR5AC2Q9NZP5 309 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 FREM1Q5H8C1 2179 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 DSPPQ9NZW4 1301 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 DISP1Q96F81 1524 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 PEG3Q9GZU2 1588 aa1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 KMT2BQ9UMN6 2715 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P36-201ENST00000487709 IGKV3D-7A0A0C4DH55 119 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 IGKV3OR2-268A0A0C4DH90 116 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 IBA57-AS1B1ANH7 110 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 K7ERU9 68 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 M0R233 179 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 UQCRQO14949 82 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 FABP4P15090 132 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 FOXA3P55318 350 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 NCS1P62166 190 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 RNASE10Q5GAN6 216 aaKnown RBP1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 Q5XG85 94 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 TMEM14EPQ6UXP3 125 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 Q8IYB0 196 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 TMEM254Q8TBM7 123 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 SPACA4Q8TDM5 124 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 POP5Q969H6 163 aaKnown RBP1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR4C12Q96R67 309 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 BANF2Q9H503 90 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 TPRKBQ9Y3C4 175 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 LHFPL6Q9Y693 200 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 DISP2A7MBM2 1401 aa1.28□□□□□ -2.2
HMGB1P36-201ENST00000487709 WDR7Q9Y4E6 1490 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms