RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 ZNF688P0C7X2 276 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 IGHV4-30-4P0DP06 118 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 ID1P41134 155 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 MEOX2P50222 304 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 DEFB131AP59861 70 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 ZFAND6Q6FIF0 208 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 FAM122CQ6P4D5 195 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 APRG1Q8IVJ8 170 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 SBSPONQ8IVN8 264 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 C16orf92Q96LL3 132 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 FAM110AQ9BQ89 295 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 SLC25A2Q9BXI2 301 aa7.93□□□□□ -1.14
TOP3B-216ENST00000487485 A8MZ25 164 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 SOCS3O14543 225 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 IGLC2P0DOY2 106 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 PYYP10082 97 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 SPP1P10451 314 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 TPT1P13693 172 aaKnown RBP7.92□□□□□ -1.14
TOP3B-216ENST00000487485 SNRPD3P62318 126 aaKnown RBP7.92□□□□□ -1.14
TOP3B-216ENST00000487485 EIF5AP63241 154 aaKnown RBP7.92□□□□□ -1.14
TOP3B-216ENST00000487485 ZNF124Q15973 351 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 PSMG4Q5JS54 123 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 BAP18Q8IXM2 172 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 C9orf62Q8N4C0 152 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 RPP25LQ8N5L8 163 aaKnown RBP7.92□□□□□ -1.14
TOP3B-216ENST00000487485 FAM167A-AS1Q96KT0 104 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 LINC00052Q96N35 136 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 CITED4Q96RK1 184 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 OR51M1Q9H341 326 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 TUBA4BQ9H853 241 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 SRD5A3Q9H8P0 318 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 RPRMQ9NS64 109 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 TMEM14CQ9P0S9 112 aa7.92□□□□□ -1.14
TOP3B-216ENST00000487485 H3BQ15 152 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 H3BTX0 84 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 ISLRO14498 428 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 EIF3GO75821 320 aaKnown RBP eCLIP7.91□□□□□ -1.14
TOP3B-216ENST00000487485 SEC11BP0C7V7 166 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 HIST1H1EP10412 219 aaKnown RBP7.91□□□□□ -1.14
TOP3B-216ENST00000487485 C4BPBP20851 252 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 CDC34P49427 236 aaPredicted RBP7.91□□□□□ -1.14
TOP3B-216ENST00000487485 PSMB3P49720 205 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 NKX2-5P52952 324 aaPredicted RBP7.91□□□□□ -1.14
TOP3B-216ENST00000487485 TAS2R45P59539 299 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 TMEM41BQ5BJD5 291 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 SAMD13Q5VXD3 122 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 IGFL4Q6B9Z1 124 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 LRRC20Q8TCA0 184 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 PAXXQ9BUH6 204 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 HRH4Q9H3N8 390 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 ZNF586Q9NXT0 402 aa7.91□□□□□ -1.14
TOP3B-216ENST00000487485 TRAV8-2A0A0B4J237 113 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 HMGB3O15347 200 aaKnown RBP7.9□□□□□ -1.14
TOP3B-216ENST00000487485 OR7C2O60412 319 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 OR10J4P0C629 311 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 FRMD6-AS1P0C7T7 363 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 GUK1Q16774 197 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 KHDC3LQ587J8 217 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 AKR1C8PQ5T2L2 129 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 LCN15Q6UWW0 184 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 STOML3Q8TAV4 291 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 BLNKQ8WV28 456 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 FXYD5Q96DB9 178 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 SAT2Q96F10 170 aaPredicted RBP7.9□□□□□ -1.14
TOP3B-216ENST00000487485 ZNF503Q96F45 646 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 C20orf173Q96LM9 149 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 SLC50A1Q9BRV3 221 aa7.9□□□□□ -1.14
TOP3B-216ENST00000487485 ACTR3CQ9C0K3 210 aaPredicted RBP7.9□□□□□ -1.14
TOP3B-216ENST00000487485 TRBV19A0A075B6N1 114 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 RBMY1BA6NDE4 496 aaKnown RBP7.89□□□□□ -1.15
TOP3B-216ENST00000487485 RBMY1EA6NEQ0 496 aaKnown RBP7.89□□□□□ -1.15
TOP3B-216ENST00000487485 SLC17A3O00476 420 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 NBEAP1P0C6P0 100 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 RBMY1DP0C7P1 496 aaKnown RBP7.89□□□□□ -1.15
TOP3B-216ENST00000487485 STAG3L2P0CL84 134 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 STAG3L3P0CL85 134 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 HLA-DMBP28068 263 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 LINC00322Q6ZN03 302 aaPredicted RBP7.89□□□□□ -1.15
TOP3B-216ENST00000487485 PQLC2Q6ZP29 291 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 SLC51BQ86UW2 128 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 RNF182Q8N6D2 247 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 RNF141Q8WVD5 230 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 RAB24Q969Q5 203 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 ZNF331Q9NQX6 463 aaPredicted RBP7.89□□□□□ -1.15
TOP3B-216ENST00000487485 PLA2G2EQ9NZK7 142 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 AGRNO00468 2067 aa7.89□□□□□ -1.15
TOP3B-216ENST00000487485 LOC102724200A0A096LPH7 203 aaPredicted RBP7.88□□□□□ -1.15
TOP3B-216ENST00000487485 KNCNA6PVL3 124 aa7.88□□□□□ -1.15
TOP3B-216ENST00000487485 DEFB1P60022 68 aa7.88□□□□□ -1.15
TOP3B-216ENST00000487485 PDE6HQ13956 83 aa7.88□□□□□ -1.15
TOP3B-216ENST00000487485 ZNF726P1Q15940 193 aa7.88□□□□□ -1.15
TOP3B-216ENST00000487485 PSG3Q16557 428 aa7.88□□□□□ -1.15
TOP3B-216ENST00000487485 ACTL10Q5JWF8 245 aa7.88□□□□□ -1.15
TOP3B-216ENST00000487485 SSX7Q7RTT5 188 aa7.88□□□□□ -1.15
TOP3B-216ENST00000487485 STHQ8IWL8 128 aa7.88□□□□□ -1.15
TOP3B-216ENST00000487485 TMED6Q8WW62 240 aa7.88□□□□□ -1.15
TOP3B-216ENST00000487485 CTXND1A0A1B0GTU2 59 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 UMAD1C9J7I0 102 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 ZNF253O75346 499 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 NDUFB4O95168 129 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms