RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 LYPD2Q6UXB3 125 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 TMEM14BQ9NUH8 114 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 FAM231BA6NCW3 169 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 TMEM86BQ8N661 226 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 C20orf144Q9BQM9 153 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 ANAPC13Q9BS18 74 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 CHCHD5Q9BSY4 110 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 ZNF492Q9P255 531 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 A8MWP6 167 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 ZNF688P0C7X2 276 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 USMG5Q96IX5 58 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 NDPQ00604 133 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 RCHY1Q96PM5 261 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 PCNX1Q96RV3 2341 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 CD5LO43866 347 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 LIME1Q9H400 295 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 GGTLC3B5MD39 225 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 TDGF1P3P51864 188 aa11.91□□□□□ -0.5
EPHB4-206ENST00000487222 H3BUX3 64 aa11.9□□□□□ -0.5
EPHB4-206ENST00000487222 CMC4P56277 68 aaPredicted RBP11.9□□□□□ -0.5
EPHB4-206ENST00000487222 C10orf91Q5T1B1 145 aa11.9□□□□□ -0.5
EPHB4-206ENST00000487222 C14orf178Q8N769 122 aaPredicted RBP11.9□□□□□ -0.5
EPHB4-206ENST00000487222 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.9□□□□□ -0.5
EPHB4-206ENST00000487222 CT83Q5H943 113 aa11.9□□□□□ -0.5
EPHB4-206ENST00000487222 PTPRDP23468 1912 aa11.9□□□□□ -0.5
EPHB4-206ENST00000487222 PRTN3P24158 256 aa11.9□□□□□ -0.5
EPHB4-206ENST00000487222 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
EPHB4-206ENST00000487222 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.5
EPHB4-206ENST00000487222 KIR3DS1Q14943 382 aa11.9□□□□□ -0.51
EPHB4-206ENST00000487222 TEX43Q6ZNM6 134 aa11.9□□□□□ -0.51
EPHB4-206ENST00000487222 CSTL1Q9H114 145 aa11.9□□□□□ -0.51
EPHB4-206ENST00000487222 IGHV2-70P01814 119 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 IGFL4Q6B9Z1 124 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 C18orf32Q8TCD1 76 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 POLR3KQ9Y2Y1 108 aaPredicted RBP11.89□□□□□ -0.51
EPHB4-206ENST00000487222 ARMS2P0C7Q2 107 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 TMEM155Q4W5P6 130 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 FAM223BA6NKX1 122 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 FAM223AQ8IWN6 122 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 B4DSR2 109 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 SMKR1H3BMG3 65 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 LINC00158P58513 81 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 RPL36AP83881 106 aaKnown RBP11.89□□□□□ -0.51
EPHB4-206ENST00000487222 RPL36ALQ969Q0 106 aaKnown RBP11.89□□□□□ -0.51
EPHB4-206ENST00000487222 DOCK7Q96N67 2140 aa11.89□□□□□ -0.51
EPHB4-206ENST00000487222 FCN3O75636 299 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 COL8A2P25067 703 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 NDUFA4L2Q9NRX3 87 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 LSM4Q9Y4Z0 139 aaKnown RBP11.88□□□□□ -0.51
EPHB4-206ENST00000487222 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 EREGO14944 169 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 ZNF415Q09FC8 603 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 DLX4Q92988 240 aaPredicted RBP11.88□□□□□ -0.51
EPHB4-206ENST00000487222 IGKV1-39P01597 117 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 IGKV1D-39P04432 117 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 ZNF726P1Q15940 193 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 WISP1O95388 367 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 CRPP02741 224 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 GAGE2BQ13066 116 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 GAGE2EQ4V326 116 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 GAGE2DQ9UEU5 116 aa11.88□□□□□ -0.51
EPHB4-206ENST00000487222 GATA4P43694 442 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 BRD3OSQ6XYD6 125 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 TMEM75Q8N9X5 138 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 CKS1BP61024 79 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 LY6G6EA0A0G2JKS1 128 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 MCRIP2Q9BUT9 160 aaKnown RBP11.87□□□□□ -0.51
EPHB4-206ENST00000487222 RHPN1-AS1Q9BWJ2 59 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 U3KQA8 63 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■■■ 26.8
EPHB4-206ENST00000487222 DOCK10Q96BY6 2186 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 TNFRSF6BO95407 300 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 YPEL3P61236 119 aaPredicted RBP11.87□□□□□ -0.51
EPHB4-206ENST00000487222 PRADC1Q9BSG0 188 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 CHAC1Q9BUX1 264 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 SELENOKQ9Y6D0 94 aa11.87□□□□□ -0.51
EPHB4-206ENST00000487222 MGAMO43451 1857 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 ZNF524Q96C55 264 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 PROK2Q9HC23 129 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 IGHV2-5P01817 119 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 RASL10AQ92737 203 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 CYYR1Q96J86 154 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 Q8TCH9 128 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 A0A1B0GUS0 222 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 E7EQL1 145 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 Q5PR19 223 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 DTX2Q86UW9 622 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 C11orf44Q8N8P7 122 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 COX11Q9Y6N1 276 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 TTC28Q96AY4 2481 aa11.86□□□□□ -0.51
EPHB4-206ENST00000487222 IGHV3-73A0A0B4J1V6 119 aa11.85□□□□□ -0.51
EPHB4-206ENST00000487222 NDUFB8O95169 186 aa11.85□□□□□ -0.51
EPHB4-206ENST00000487222 ZNRD1Q9P1U0 126 aa11.85□□□□□ -0.51
EPHB4-206ENST00000487222 GAGE12BA1L429 117 aa11.85□□□□□ -0.51
EPHB4-206ENST00000487222 RSPO1Q2MKA7 263 aaPredicted RBP11.85□□□□□ -0.51
EPHB4-206ENST00000487222 Q6ZR03 302 aa11.85□□□□□ -0.51
EPHB4-206ENST00000487222 FAM231DQ6ZW35 169 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms