RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TMEM144Q7Z5S9 345 aa13.49□□□□□ -0.25
SMPDL3A-202ENST00000487215 OR8A1Q8NGG7 326 aa13.49□□□□□ -0.25
SMPDL3A-202ENST00000487215 NOP10Q9NPE3 64 aaKnown RBP13.49□□□□□ -0.25
SMPDL3A-202ENST00000487215 BTF3P20290 206 aaKnown RBP13.48□□□□□ -0.25
SMPDL3A-202ENST00000487215 ID3Q02535 119 aa13.48□□□□□ -0.25
SMPDL3A-202ENST00000487215 RNASE8Q8TDE3 154 aaKnown RBP13.48□□□□□ -0.25
SMPDL3A-202ENST00000487215 GNPNAT1Q96EK6 184 aaPredicted RBP13.48□□□□□ -0.25
SMPDL3A-202ENST00000487215 SHANK2-AS3Q9BTD1 123 aa13.48□□□□□ -0.25
SMPDL3A-202ENST00000487215 PPP1R14DQ9NXH3 145 aa13.48□□□□□ -0.25
SMPDL3A-202ENST00000487215 TRAV26-1A0A087WT03 109 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 C9orf170A2RU37 121 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 PRB4P10163 310 aaPredicted RBP13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 RPL7P18124 248 aaKnown RBP13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 CXCL3P19876 107 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 RAP2BP61225 183 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 OR5I1Q13606 314 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 TRIQKQ629K1 86 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 ZNF493Q6ZR52 646 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 ACOT7LQ6ZUV0 252 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 TMEM263Q8WUH6 116 aaKnown RBP13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 UPK3BQ9BT76 320 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 RNF24Q9Y225 148 aa13.47□□□□□ -0.25
SMPDL3A-202ENST00000487215 ZNF701M0R085 212 aaPredicted RBP13.46□□□□□ -0.25
SMPDL3A-202ENST00000487215 IL5P05113 134 aa13.46□□□□□ -0.25
SMPDL3A-202ENST00000487215 M6PRP20645 277 aa13.46□□□□□ -0.25
SMPDL3A-202ENST00000487215 SELENOTP62341 195 aa13.46□□□□□ -0.25
SMPDL3A-202ENST00000487215 OR10J6PQ8NGY7 276 aa13.46□□□□□ -0.25
SMPDL3A-202ENST00000487215 RXFP4Q8TDU9 374 aa13.46□□□□□ -0.25
SMPDL3A-202ENST00000487215 ZNF503Q96F45 646 aa13.46□□□□□ -0.25
SMPDL3A-202ENST00000487215 PSENENQ9NZ42 101 aa13.46□□□□□ -0.25
SMPDL3A-202ENST00000487215 A0A087X0K7 114 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 A0A0J9YY99 117 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 A0A1W2PPQ1 181 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 SMCO3A2RU48 225 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 CENPXA8MT69 81 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 H3BP45 60 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 NDUFB6O95139 128 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 CDKN1BP46527 198 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 DLK1P80370 383 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 PSG3Q16557 428 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 ESRGQ1W209 222 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 CYP2G1PQ6ZSU1 146 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 LINC00612Q8N6U2 182 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 SRRQ9GZT4 340 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 HIGD1AQ9Y241 93 aa13.45□□□□□ -0.26
SMPDL3A-202ENST00000487215 EPM2AB3EWF7 344 aa13.44□□□□□ -0.26
SMPDL3A-202ENST00000487215 HYPMO75409 117 aa13.44□□□□□ -0.26
SMPDL3A-202ENST00000487215 HOXA5P20719 270 aa13.44□□□□□ -0.26
SMPDL3A-202ENST00000487215 POLR2GP62487 172 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMPDL3A-202ENST00000487215 SMIM8Q96KF7 97 aa13.44□□□□□ -0.26
SMPDL3A-202ENST00000487215 MRPS16Q9Y3D3 137 aaKnown RBP13.44□□□□□ -0.26
SMPDL3A-202ENST00000487215 FNDC10F2Z333 226 aa13.43□□□□□ -0.26
SMPDL3A-202ENST00000487215 H7BYZ3 331 aa13.43□□□□□ -0.26
SMPDL3A-202ENST00000487215 ADAP1O75689 374 aa13.43□□□□□ -0.26
SMPDL3A-202ENST00000487215 OR4E1P0C645 316 aa13.43□□□□□ -0.26
SMPDL3A-202ENST00000487215 CNPY1Q3B7I2 92 aa13.43□□□□□ -0.26
SMPDL3A-202ENST00000487215 RPUSD4Q96CM3 377 aaKnown RBP13.43□□□□□ -0.26
SMPDL3A-202ENST00000487215 ZNF586Q9NXT0 402 aa13.43□□□□□ -0.26
SMPDL3A-202ENST00000487215 SSSCA1O60232 199 aa13.42□□□□□ -0.26
SMPDL3A-202ENST00000487215 OR5G3P0C626 314 aa13.42□□□□□ -0.26
SMPDL3A-202ENST00000487215 LINC00869P0C866 280 aa13.42□□□□□ -0.26
SMPDL3A-202ENST00000487215 PLP1P60201 277 aa13.42□□□□□ -0.26
SMPDL3A-202ENST00000487215 KIR3DS1Q14943 382 aa13.42□□□□□ -0.26
SMPDL3A-202ENST00000487215 C4orf46Q504U0 113 aa13.42□□□□□ -0.26
SMPDL3A-202ENST00000487215 OR10P1Q8NGE3 313 aa13.42□□□□□ -0.26
SMPDL3A-202ENST00000487215 LRRC20Q8TCA0 184 aa13.42□□□□□ -0.26
SMPDL3A-202ENST00000487215 NPVFQ9HCQ7 196 aa13.42□□□□□ -0.26
SMPDL3A-202ENST00000487215 FAT1Q14517 4588 aa13.41□□□□□ -0.26
SMPDL3A-202ENST00000487215 GAGE12BA1L429 117 aa13.41□□□□□ -0.26
SMPDL3A-202ENST00000487215 GAGE7O76087 117 aa13.41□□□□□ -0.26
SMPDL3A-202ENST00000487215 GAGE12FP0CL80 117 aa13.41□□□□□ -0.26
SMPDL3A-202ENST00000487215 GAGE12GP0CL81 117 aa13.41□□□□□ -0.26
SMPDL3A-202ENST00000487215 GAGE12IP0CL82 117 aa13.41□□□□□ -0.26
SMPDL3A-202ENST00000487215 TAS2R30P59541 319 aa13.41□□□□□ -0.26
SMPDL3A-202ENST00000487215 C20orf144Q9BQM9 153 aa13.41□□□□□ -0.26
SMPDL3A-202ENST00000487215 MGAT4CQ9UBM8 478 aa13.41□□□□□ -0.26
SMPDL3A-202ENST00000487215 H3BNG1 76 aa13.4□□□□□ -0.26
SMPDL3A-202ENST00000487215 MRPS12O15235 138 aaKnown RBP13.4□□□□□ -0.26
SMPDL3A-202ENST00000487215 LINC00315P59091 139 aa13.4□□□□□ -0.26
SMPDL3A-202ENST00000487215 PXDC1Q5TGL8 231 aa13.4□□□□□ -0.26
SMPDL3A-202ENST00000487215 PARD6GQ9BYG4 376 aaPredicted RBP13.4□□□□□ -0.26
SMPDL3A-202ENST00000487215 RBM38Q9H0Z9 239 aaKnown RBP13.4□□□□□ -0.26
SMPDL3A-202ENST00000487215 PMS2P5A8MQ11 134 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 K7EPK0 472 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 TSC22D2O75157 780 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 RLN2P04090 185 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 BAK1Q16611 211 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 GFI1BQ5VTD9 330 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 TEPPQ6URK8 271 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 TMEM14EPQ6UXP3 125 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 Q6ZRN7 208 aaPredicted RBP13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 CCDC28AQ8IWP9 274 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 FLVCR2Q9UPI3 526 aa13.39□□□□□ -0.27
SMPDL3A-202ENST00000487215 SCGB1D2O95969 90 aa13.38□□□□□ -0.27
SMPDL3A-202ENST00000487215 METTL15P1P0C7V9 234 aa13.38□□□□□ -0.27
SMPDL3A-202ENST00000487215 INAFM2P0DMQ5 153 aa13.38□□□□□ -0.27
SMPDL3A-202ENST00000487215 IAH1Q2TAA2 248 aaPredicted RBP13.38□□□□□ -0.27
SMPDL3A-202ENST00000487215 PATE2Q6UY27 113 aa13.38□□□□□ -0.27
SMPDL3A-202ENST00000487215 GGACTQ9BVM4 153 aa13.38□□□□□ -0.27
SMPDL3A-202ENST00000487215 ZNF331Q9NQX6 463 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms