RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
PHF1-208ENST00000486845 OR5G3P0C626 314 aa13.89□□□□□ -0.19
PHF1-208ENST00000486845 FAUP35544 74 aaKnown RBP13.89□□□□□ -0.19
PHF1-208ENST00000486845 RPUSD4Q96CM3 377 aaKnown RBP13.89□□□□□ -0.19
PHF1-208ENST00000486845 UHRF2Q96PU4 802 aa13.89□□□□□ -0.19
PHF1-208ENST00000486845 C20orf144Q9BQM9 153 aa13.89□□□□□ -0.19
PHF1-208ENST00000486845 H3BP45 60 aa13.88□□□□□ -0.19
PHF1-208ENST00000486845 LINC00869P0C866 280 aa13.88□□□□□ -0.19
PHF1-208ENST00000486845 PLP1P60201 277 aa13.88□□□□□ -0.19
PHF1-208ENST00000486845 SELENOTP62341 195 aa13.88□□□□□ -0.19
PHF1-208ENST00000486845 LINC00612Q8N6U2 182 aa13.88□□□□□ -0.19
PHF1-208ENST00000486845 MRPS26Q9BYN8 205 aaKnown RBP13.88□□□□□ -0.19
PHF1-208ENST00000486845 CCDC59Q9P031 241 aaKnown RBP13.88□□□□□ -0.19
PHF1-208ENST00000486845 MRPS16Q9Y3D3 137 aaKnown RBP13.88□□□□□ -0.19
PHF1-208ENST00000486845 A0A0J9YY99 117 aa13.87□□□□□ -0.19
PHF1-208ENST00000486845 H3BNG1 76 aa13.87□□□□□ -0.19
PHF1-208ENST00000486845 ZNF701M0R085 212 aaPredicted RBP13.87□□□□□ -0.19
PHF1-208ENST00000486845 ESRGQ1W209 222 aa13.87□□□□□ -0.19
PHF1-208ENST00000486845 CCDC28AQ8IWP9 274 aa13.87□□□□□ -0.19
PHF1-208ENST00000486845 RNF24Q9Y225 148 aa13.87□□□□□ -0.19
PHF1-208ENST00000486845 EPM2AB3EWF7 344 aa13.86□□□□□ -0.19
PHF1-208ENST00000486845 CXCL2P19875 107 aa13.86□□□□□ -0.19
PHF1-208ENST00000486845 ZNF586Q9NXT0 402 aa13.86□□□□□ -0.19
PHF1-208ENST00000486845 SFT2D2O95562 160 aa13.85□□□□□ -0.19
PHF1-208ENST00000486845 RLN2P04090 185 aa13.85□□□□□ -0.19
PHF1-208ENST00000486845 HOXB5P09067 269 aa13.85□□□□□ -0.19
PHF1-208ENST00000486845 HOXA5P20719 270 aa13.85□□□□□ -0.19
PHF1-208ENST00000486845 DLK1P80370 383 aa13.85□□□□□ -0.19
PHF1-208ENST00000486845 DYNC2LI1Q8TCX1 351 aa13.85□□□□□ -0.19
PHF1-208ENST00000486845 GAGE12BA1L429 117 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 FABP12A6NFH5 140 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 SNURFLB1AK76 121 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 GAGE7O76087 117 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 GAGE12FP0CL80 117 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 GAGE12GP0CL81 117 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 GAGE12IP0CL82 117 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 PRB4P10163 310 aaPredicted RBP13.84□□□□□ -0.19
PHF1-208ENST00000486845 ANXA7P20073 488 aaKnown RBP13.84□□□□□ -0.19
PHF1-208ENST00000486845 AP3S2P59780 193 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 LCN15Q6UWW0 184 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 SOSTQ9BQB4 213 aa13.84□□□□□ -0.19
PHF1-208ENST00000486845 DMBT1Q9UGM3 2413 aaPredicted RBP13.84□□□□□ -0.19
PHF1-208ENST00000486845 PMS2P5A8MQ11 134 aa13.83□□□□□ -0.2
PHF1-208ENST00000486845 MRPS12O15235 138 aaKnown RBP13.83□□□□□ -0.2
PHF1-208ENST00000486845 PPP1R1AQ13522 171 aa13.83□□□□□ -0.2
PHF1-208ENST00000486845 GFI1BQ5VTD9 330 aa13.83□□□□□ -0.2
PHF1-208ENST00000486845 SLC25A21Q9BQT8 299 aaPredicted RBP13.83□□□□□ -0.2
PHF1-208ENST00000486845 SLC50A1Q9BRV3 221 aa13.83□□□□□ -0.2
PHF1-208ENST00000486845 ARL6Q9H0F7 186 aa13.83□□□□□ -0.2
PHF1-208ENST00000486845 ZNF331Q9NQX6 463 aaPredicted RBP13.83□□□□□ -0.2
PHF1-208ENST00000486845 TNFSF8P32971 234 aa13.82□□□□□ -0.2
PHF1-208ENST00000486845 KIR3DS1Q14943 382 aa13.82□□□□□ -0.2
PHF1-208ENST00000486845 RAB2BQ8WUD1 216 aa13.82□□□□□ -0.2
PHF1-208ENST00000486845 ARV1Q9H2C2 271 aa13.82□□□□□ -0.2
PHF1-208ENST00000486845 PSENENQ9NZ42 101 aa13.82□□□□□ -0.2
PHF1-208ENST00000486845 K7EPK0 472 aa13.81□□□□□ -0.2
PHF1-208ENST00000486845 LINC00315P59091 139 aa13.81□□□□□ -0.2
PHF1-208ENST00000486845 POLR2GP62487 172 aaKnown RBP eCLIP13.81□□□□□ -0.2
PHF1-208ENST00000486845 ID3Q02535 119 aa13.81□□□□□ -0.2
PHF1-208ENST00000486845 PXDC1Q5TGL8 231 aa13.81□□□□□ -0.2
PHF1-208ENST00000486845 PATE2Q6UY27 113 aa13.81□□□□□ -0.2
PHF1-208ENST00000486845 CCDC190Q86UF4 302 aa13.81□□□□□ -0.2
PHF1-208ENST00000486845 TOMM5Q8N4H5 51 aa13.81□□□□□ -0.2
PHF1-208ENST00000486845 PARD6GQ9BYG4 376 aaPredicted RBP13.81□□□□□ -0.2
PHF1-208ENST00000486845 PTTG2Q9NZH5 202 aa13.81□□□□□ -0.2
PHF1-208ENST00000486845 FNDC10F2Z333 226 aa13.8□□□□□ -0.2
PHF1-208ENST00000486845 MCFD2Q8NI22 146 aa13.8□□□□□ -0.2
PHF1-208ENST00000486845 TRIM63Q969Q1 353 aa13.8□□□□□ -0.2
PHF1-208ENST00000486845 BCL7BQ9BQE9 202 aa13.8□□□□□ -0.2
PHF1-208ENST00000486845 TMPRSS5Q9H3S3 457 aa13.8□□□□□ -0.2
PHF1-208ENST00000486845 NPVFQ9HCQ7 196 aa13.8□□□□□ -0.2
PHF1-208ENST00000486845 PGPEP1Q9NXJ5 209 aa13.8□□□□□ -0.2
PHF1-208ENST00000486845 EREGO14944 169 aa13.79□□□□□ -0.2
PHF1-208ENST00000486845 RRAS2P62070 204 aaPredicted RBP13.79□□□□□ -0.2
PHF1-208ENST00000486845 DAZ2Q13117 558 aaKnown RBP13.79□□□□□ -0.2
PHF1-208ENST00000486845 SLIRPQ9GZT3 109 aaKnown RBP13.79□□□□□ -0.2
PHF1-208ENST00000486845 MGAT4CQ9UBM8 478 aa13.79□□□□□ -0.2
PHF1-208ENST00000486845 SSSCA1O60232 199 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 INAFM2P0DMQ5 153 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 LEPP41159 167 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 SLC38A11Q08AI6 406 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 TEPPQ6URK8 271 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 Q6ZRN7 208 aaPredicted RBP13.78□□□□□ -0.2
PHF1-208ENST00000486845 LINC00305Q7Z4B0 112 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 ZNF546Q86UE3 836 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 BPIFA4PQ86YQ2 179 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 DEDD2Q8WXF8 326 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 SMIM8Q96KF7 97 aa13.78□□□□□ -0.2
PHF1-208ENST00000486845 A0A096LPF7 62 aa13.77□□□□□ -0.21
PHF1-208ENST00000486845 PRAC2D3DTV9 90 aa13.77□□□□□ -0.21
PHF1-208ENST00000486845 GOSR2O14653 212 aa13.77□□□□□ -0.21
PHF1-208ENST00000486845 CCNKO75909 580 aa13.77□□□□□ -0.21
PHF1-208ENST00000486845 SNRPCP09234 159 aaKnown RBP13.77□□□□□ -0.21
PHF1-208ENST00000486845 METTL15P1P0C7V9 234 aa13.77□□□□□ -0.21
PHF1-208ENST00000486845 TMBIM6P55061 237 aa13.77□□□□□ -0.21
PHF1-208ENST00000486845 ERVFC1-1P60608 527 aa13.77□□□□□ -0.21
PHF1-208ENST00000486845 UBE2MP61081 183 aaKnown RBP13.77□□□□□ -0.21
PHF1-208ENST00000486845 PYDC2Q56P42 97 aa13.77□□□□□ -0.21
PHF1-208ENST00000486845 CDPF1Q6NVV7 123 aa13.77□□□□□ -0.21
PHF1-208ENST00000486845 TMEM14EPQ6UXP3 125 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms