RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 OR5AC1P0C628 307 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 CT45A10P0DMU9 189 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 KIR2DS2P43631 304 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 APOC4P55056 127 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF322Q6U7Q0 402 aaPredicted RBP5.19□□□□□ -1.58
HDAC3-209ENST00000486618 IZUMO2Q6UXV1 221 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 Q6ZVH6 145 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 HOGA1Q86XE5 327 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 CBLN2Q8IUK8 224 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.19□□□□□ -1.58
HDAC3-209ENST00000486618 OR9G1Q8NH87 305 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 RXFP4Q8TDU9 374 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 C4orf3Q8WVX3 66 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 RARRES2Q99969 163 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 TTTY10Q9BZA0 68 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF286AQ9HBT8 521 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 NUFIP1Q9UHK0 495 aaKnown RBP5.19□□□□□ -1.58
HDAC3-209ENST00000486618 TRBV5-5A0A0J9YX44 114 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 MEIS3P1A6NDR6 274 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 RBFOX3A6NFN3 312 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-209ENST00000486618 J3QRK9 145 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 PDCD5O14737 125 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 MPPED1O15442 326 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 MT-ND4LP03901 98 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 HIST1H1DP16402 221 aaKnown RBP5.18□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF19P17023 458 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 CXCL3P19876 107 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 NTF3P20783 257 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 NFYBP25208 207 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 HNRNPA3P51991 378 aaKnown RBP5.18□□□□□ -1.58
HDAC3-209ENST00000486618 MEF2BQ02080 365 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-209ENST00000486618 PEA15Q15121 130 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 RASL11AQ6T310 242 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 GLIPR1L1Q6UWM5 242 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 SLC25A26Q70HW3 274 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF664Q8N3J9 261 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 FER1L6-AS1Q8NA97 138 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 BLNKQ8WV28 456 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 DERL3Q96Q80 235 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 S100A13Q99584 98 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 TM2D3Q9BRN9 247 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 PRADC1Q9BSG0 188 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 RTBDNQ9BSG5 229 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-209ENST00000486618 EDA2RQ9HAV5 297 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 AKIP1Q9NQ31 210 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 R4GMQ9 66 aa5.18□□□□□ -1.58
HDAC3-209ENST00000486618 TRAV5A0A0B4J249 113 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 GAGE12HA6NDE8 117 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 A6NIN4 97 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 NCBP2LA6PVI3 153 aaKnown RBP5.17□□□□□ -1.58
HDAC3-209ENST00000486618 K7EMT4 169 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 K7EPK0 472 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 IGKV1D-33P01593 117 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 IGKV1-33P01594 117 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 VDAC1P21796 283 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 RND3P61587 244 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 IFITM3Q01628 133 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF146Q15072 292 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 CTF1Q16619 201 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 PRSS48Q7RTY5 328 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 FAM71E2Q8N5Q1 922 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 OR51A4Q8NGJ6 313 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 PHLDA1Q8WV24 401 aaPredicted RBP5.17□□□□□ -1.58
HDAC3-209ENST00000486618 THTPAQ9BU02 230 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 TMEM222Q9H0R3 208 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 CYSLTR1Q9Y271 337 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 ORC6Q9Y5N6 252 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 DNAH1Q9P2D7 4330 aa5.17□□□□□ -1.58
HDAC3-209ENST00000486618 LYSTQ99698 3801 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 ODAMA1E959 279 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 LINC01548A6NM66 108 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 H3BSH0 61 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 OVOL1O14753 267 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 TNFSF12O43508 249 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 MRPS14O60783 128 aaKnown RBP5.16□□□□□ -1.58
HDAC3-209ENST00000486618 NXPH3O95157 252 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 SPNP16150 400 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 CXCL2P19875 107 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 IL3RAP26951 378 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 TGFBR1P36897 503 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 TMBIM6P55061 237 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 NDUFA6P56556 154 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 H2BFSP57053 126 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 NANOS3P60323 173 aaKnown RBP5.16□□□□□ -1.58
HDAC3-209ENST00000486618 DEFA5Q01523 94 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 IL15RAQ13261 267 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 RIGQ13278 110 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 EBI3Q14213 229 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF726P1Q15940 193 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 IQCJQ1A5X6 159 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 PIK3CD-AS1Q5SR53 167 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 TMEM244Q5VVB8 128 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 SPATA31B1PQ5VZV4 182 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 TMEM236Q5W0B7 351 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF773Q6PK81 442 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 OR51T1Q8NGJ9 327 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 OR2T10Q8NGZ9 312 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 ADAT3Q96EY9 351 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms