RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 RPP25LQ8N5L8 163 aaKnown RBP5.3□□□□□ -1.56
UBR4-214ENST00000486515 LINC00482Q8N8I6 264 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 OR2K2Q8NGT1 345 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 SCRT1Q9BWW7 348 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 NKX6-2Q9C056 277 aaPredicted RBP5.3□□□□□ -1.56
UBR4-214ENST00000486515 HRH4Q9H3N8 390 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 SEPSECSQ9HD40 501 aaKnown RBP5.3□□□□□ -1.56
UBR4-214ENST00000486515 CLEC5AQ9NY25 188 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 SIGLEC8Q9NYZ4 499 aa5.3□□□□□ -1.56
UBR4-214ENST00000486515 CHTOPQ9Y3Y2 248 aaKnown RBP5.3□□□□□ -1.56
UBR4-214ENST00000486515 TRAV25A0A0B4J276 109 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 A0A1B0GV50 99 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 TMEM213A2RRL7 107 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 OR4C46A6NHA9 309 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 ADARB2-AS1A8MUL3 147 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 K7EQM0 130 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 HMGB3O15347 200 aaKnown RBP5.29□□□□□ -1.56
UBR4-214ENST00000486515 OR10J4P0C629 311 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 NBEAP1P0C6P0 100 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 HIST1H1EP10412 219 aaKnown RBP5.29□□□□□ -1.56
UBR4-214ENST00000486515 TAGLN2P37802 199 aaKnown RBP5.29□□□□□ -1.56
UBR4-214ENST00000486515 CSN1S1P47710 185 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 GCSAMLQ5JQS6 135 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 LEMD1Q68G75 181 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 PATE2Q6UY27 113 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 GTSCR1Q86UQ5 136 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 LINC00518Q8N0U6 118 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 CMTM2Q8TAZ6 248 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 BLNKQ8WV28 456 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 C16orf92Q96LL3 132 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 SLC50A1Q9BRV3 221 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 VSIRQ9H7M9 311 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 NRN1Q9NPD7 142 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 MANBALQ9NQG1 85 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 TMEM14CQ9P0S9 112 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 RFNGQ9Y644 331 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 TNCP24821 2201 aa5.29□□□□□ -1.56
UBR4-214ENST00000486515 TRAV5A0A0B4J249 113 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 F6UZH7 168 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 CSN3P07498 182 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 STAG3L2P0CL84 134 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 STAG3L3P0CL85 134 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 ARL14EPLP0DKL9 152 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 GCHFRP30047 84 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 TFPI2P48307 235 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 PDE6HQ13956 83 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 CST9LP1Q5W188 147 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 WFDC3Q8IUB2 231 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 CCDC28AQ8IWP9 274 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 LYPD1Q8N2G4 141 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 GBGT1Q8N5D6 347 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 SPAG8Q99932 426 aaPredicted RBP5.28□□□□□ -1.56
UBR4-214ENST00000486515 EIF5A2Q9GZV4 153 aaKnown RBP5.28□□□□□ -1.56
UBR4-214ENST00000486515 GNG13Q9P2W3 67 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
UBR4-214ENST00000486515 TSPAN4O14817 238 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 APOHP02749 345 aaPredicted RBP5.27□□□□□ -1.57
UBR4-214ENST00000486515 FHITP49789 147 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 FGF8P55075 233 aaPredicted RBP5.27□□□□□ -1.57
UBR4-214ENST00000486515 RANP62826 216 aaKnown RBP5.27□□□□□ -1.57
UBR4-214ENST00000486515 DEFB114Q30KQ6 69 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 CD300EQ496F6 205 aaPredicted RBP5.27□□□□□ -1.57
UBR4-214ENST00000486515 SPATA31B1PQ5VZV4 182 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 RXFP4Q8TDU9 374 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 GLMPQ8WWB7 406 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 MBD3L1Q8WWY6 194 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 LINC00052Q96N35 136 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 SLC25A2Q9BXI2 301 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 MLXQ9UH92 298 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 U3KQE9 123 aa5.27□□□□□ -1.57
UBR4-214ENST00000486515 TRBV19A0A075B6N1 114 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 A0A087X0K7 114 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 TRAV2A0A0B4J234 112 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 TRAV1-1A0A0B4J248 108 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 ISLRO14498 428 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 ZNF253O75346 499 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 PYYP10082 97 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 GP9P14770 177 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 IGLL1P15814 213 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 UBE2G2P60604 165 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 EBLN2Q6P2I7 272 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 ZNF738Q8NE65 137 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 WFDC9Q8NEX5 89 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 TXNDC17Q9BRA2 123 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 MS4A6AQ9H2W1 248 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 ARL2-SNX15V9GYD0 113 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 TENM2Q9NT68 2774 aa5.26□□□□□ -1.57
UBR4-214ENST00000486515 COL7A1Q02388 2944 aa5.25□□□□□ -1.57
UBR4-214ENST00000486515 SERTM2A0A1B0GWG4 89 aa5.25□□□□□ -1.57
UBR4-214ENST00000486515 A0A1W2PRE2 83 aa5.25□□□□□ -1.57
UBR4-214ENST00000486515 PGPA6NDG6 321 aa5.25□□□□□ -1.57
UBR4-214ENST00000486515 OR11H12B2RN74 326 aa5.25□□□□□ -1.57
UBR4-214ENST00000486515 H3BTX0 84 aa5.25□□□□□ -1.57
UBR4-214ENST00000486515 PDE6DO43924 150 aa5.25□□□□□ -1.57
UBR4-214ENST00000486515 IGLV1-51P01701 117 aa5.25□□□□□ -1.57
UBR4-214ENST00000486515 SLC25A5P05141 298 aaKnown RBP5.25□□□□□ -1.57
UBR4-214ENST00000486515 S100A9P06702 114 aaKnown RBP5.25□□□□□ -1.57
UBR4-214ENST00000486515 SNRPCP09234 159 aaKnown RBP5.25□□□□□ -1.57
UBR4-214ENST00000486515 PEA15Q15121 130 aa5.25□□□□□ -1.57
UBR4-214ENST00000486515 ZNF726P1Q15940 193 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms