RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 UBE2G2P60604 165 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 RANP62826 216 aaKnown RBP10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 ICAM4Q14773 271 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 SAMD13Q5VXD3 122 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 CITED4Q96RK1 184 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 TCEAL7Q9BRU2 100 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 SLC35B3Q9H1N7 401 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 AAMDCQ9H7C9 122 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 SIGLEC8Q9NYZ4 499 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 SMAD5-AS1Q9Y6J3 95 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 ATRQ13535 2644 aa10.08□□□□□ -0.8
VTI1BP1-201ENST00000486325 F6UZH7 168 aa10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 TMEM250H0YL14 139 aa10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 PF4P02776 101 aa10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 RPL11P62913 178 aaKnown RBP10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 SUMO1P63165 101 aaKnown RBP10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 HIST2H2BDQ6DRA6 164 aa10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 C12orf54Q6X4T0 127 aa10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 ARL6IP6Q8N6S5 226 aa10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 C3orf56Q8N813 242 aa10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 SLC50A1Q9BRV3 221 aa10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 OTORQ9NRC9 128 aa10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 YTHDF2Q9Y5A9 579 aaKnown RBP10.07□□□□□ -0.8
VTI1BP1-201ENST00000486325 PGPA6NDG6 321 aa10.06□□□□□ -0.8
VTI1BP1-201ENST00000486325 CSN3P07498 182 aa10.06□□□□□ -0.8
VTI1BP1-201ENST00000486325 PAFAH1B2P68402 229 aa10.06□□□□□ -0.8
VTI1BP1-201ENST00000486325 SHISA2Q6UWI4 295 aa10.06□□□□□ -0.8
VTI1BP1-201ENST00000486325 TCF24Q7RTU0 167 aa10.06□□□□□ -0.8
VTI1BP1-201ENST00000486325 RPUSD4Q96CM3 377 aaKnown RBP10.06□□□□□ -0.8
VTI1BP1-201ENST00000486325 NRN1Q9NPD7 142 aa10.06□□□□□ -0.8
VTI1BP1-201ENST00000486325 PRELID1Q9Y255 219 aa10.06□□□□□ -0.8
VTI1BP1-201ENST00000486325 CUBNO60494 3623 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 TMEM218A2RU14 115 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 KRBOX1C9JBD0 128 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 NDUFB4O95168 129 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 SRP19P09132 144 aaKnown RBP10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 CD81P60033 236 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 SRSF3P84103 164 aaKnown RBP10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 CCDC28AQ8IWP9 274 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 CMTM2Q8TAZ6 248 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 HIST1H2BAQ96A08 127 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 C17orf77Q96MU5 243 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 Q9H3A6 140 aa10.05□□□□□ -0.8
VTI1BP1-201ENST00000486325 TRAV25A0A0B4J276 109 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 SLC25A5P05141 298 aaKnown RBP10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 SNRPCP09234 159 aaKnown RBP10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 ID1P41134 155 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 CSN1S1P47710 185 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 ATP5G3P48201 142 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 FAM90A2PQ658T7 463 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 C5orf17Q8NAS9 161 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 DYNLRB2Q8TF09 96 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 ZNF331Q9NQX6 463 aaPredicted RBP10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 MLXQ9UH92 298 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 EPDR1Q9UM22 224 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 WNK1Q9H4A3 2382 aa10.04□□□□□ -0.8
VTI1BP1-201ENST00000486325 GGTLC3B5MD39 225 aa10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 H3BTX0 84 aa10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 DNASE2O00115 360 aaPredicted RBP10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 S100A1P23297 94 aa10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 DEFB114Q30KQ6 69 aa10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 FAM74A3Q4VXF1 159 aa10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 SOHLH1Q5JUK2 328 aa10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 ADAMTSL5Q6ZMM2 481 aa10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 RBPMS2Q6ZRY4 209 aaKnown RBP10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 C16orf92Q96LL3 132 aa10.03□□□□□ -0.8
VTI1BP1-201ENST00000486325 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 SERTM2A0A1B0GWG4 89 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 C9JQL5 133 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 K7EQM0 130 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 ISLRO14498 428 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 S100A9P06702 114 aaKnown RBP10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 SFTA3P0C7M3 94 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 LINC00482Q8N8I6 264 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 OR2K2Q8NGT1 345 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 C11orf52Q96A22 123 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 MRPL53Q96EL3 112 aaKnown RBP10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 SEC11CQ9BY50 192 aa10.02□□□□□ -0.81
VTI1BP1-201ENST00000486325 F8W036 122 aa10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 SLC17A3O00476 420 aa10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 TSPAN4O14817 238 aa10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 EDN2P20800 178 aa10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 INSL3P51460 131 aa10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 EXOC3-AS1Q8N2X6 119 aa10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 ATG101Q9BSB4 218 aa10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 MCRIP2Q9BUT9 160 aaKnown RBP10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 MS4A6AQ9H2W1 248 aa10.01□□□□□ -0.81
VTI1BP1-201ENST00000486325 FBLL1A6NHQ2 334 aaKnown RBP10□□□□□ -0.81
VTI1BP1-201ENST00000486325 PEX7O00628 323 aa10□□□□□ -0.81
VTI1BP1-201ENST00000486325 ATP6V1G1O75348 118 aa10□□□□□ -0.81
VTI1BP1-201ENST00000486325 SAP30O75446 220 aa10□□□□□ -0.81
VTI1BP1-201ENST00000486325 CNN1P51911 297 aaKnown RBP10□□□□□ -0.81
VTI1BP1-201ENST00000486325 CEBPGP53567 150 aa10□□□□□ -0.81
VTI1BP1-201ENST00000486325 SNRPD3P62318 126 aaKnown RBP10□□□□□ -0.81
VTI1BP1-201ENST00000486325 PSG3Q16557 428 aa10□□□□□ -0.81
VTI1BP1-201ENST00000486325 LCN12Q6JVE5 192 aa10□□□□□ -0.81
VTI1BP1-201ENST00000486325 IGKV3-7A0A075B6H7 116 aa9.99□□□□□ -0.81
VTI1BP1-201ENST00000486325 SCO2A0A1W2PP80 73 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms