RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ZNF524Q96C55 264 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 ZNF714Q96N38 554 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 ZNF702PQ9H963 129 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 ST20Q9HBF5 79 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 RPS10P5Q9NQ39 176 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 TAC3Q9UHF0 121 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 V9GYH0 126 aa3.36□□□□□ -1.87
RTN4-213ENST00000485749 MTCL1Q9Y4B5 1905 aaKnown RBP3.36□□□□□ -1.87
RTN4-213ENST00000485749 IGHV3-38A0A0C4DH36 116 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 A0A1B0GUV1 79 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 TMEM235A6NFC5 223 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 OOSP1A8MZH6 123 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 H3BRM9 83 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 HCRTO43612 131 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 YPEL1O60688 119 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 HLA-DQA1P01909 254 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 GYPBP06028 91 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 INAFM2P0DMQ5 153 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 SLC25A6P12236 298 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 DYNLT3P51808 116 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 SMIM11AP58511 58 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 SNRPGP62308 76 aaKnown RBP3.35□□□□□ -1.87
RTN4-213ENST00000485749 REG3AQ06141 175 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 CDK5R1Q15078 307 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 TMEM155Q4W5P6 130 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 TMEM190Q8WZ59 177 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 RMI2Q96E14 147 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 IMMP2LQ96T52 175 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 PYGO2Q9BRQ0 406 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 PLA2G2FQ9BZM2 168 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 NDUFB11Q9NX14 153 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 CACFD1Q9UGQ2 172 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 KLK13Q9UKR3 277 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 EPDR1Q9UM22 224 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 SPCS1Q9Y6A9 102 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 A0A0G2JMZ2 1700 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 LRRC37A2A6NM11 1700 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 UBR3Q6ZT12 1888 aa3.35□□□□□ -1.87
RTN4-213ENST00000485749 DOCK3Q8IZD9 2030 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 IGLV3-10A0A075B6K4 115 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 TRGV5A0A0B4J1U4 118 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 A0A1B0GW54 56 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 K7EQG2 157 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 CCL22O00626 93 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 LYRM1O43325 122 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 SSSCA1O60232 199 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 LTAP01374 205 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 PRM2P04554 102 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 CD7P09564 240 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 TRGC1P0CF51 173 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 ZNF286BP0CG31 522 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 ZNF80P51504 273 aaPredicted RBP3.34□□□□□ -1.87
RTN4-213ENST00000485749 CCL20P78556 96 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 ZNF79Q15937 498 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 LGALSLQ3ZCW2 172 aaPredicted RBP3.34□□□□□ -1.87
RTN4-213ENST00000485749 CXCL17Q6UXB2 119 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 MARCH3Q86UD3 253 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 MORN4Q8NDC4 146 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 NUP37Q8NFH4 326 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 OR10AG1Q8NH19 301 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 FLVCR1-AS1Q8TAF5 88 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 TMEM158Q8WZ71 300 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 SHANK2-AS3Q9BTD1 123 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 PARP14Q460N5 1801 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 DENND4AQ7Z401 1863 aa3.34□□□□□ -1.87
RTN4-213ENST00000485749 PTPRFP10586 1907 aa3.34□□□□□ -1.88
RTN4-213ENST00000485749 ANKRD31Q8N7Z5 1873 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 DOCK5Q9H7D0 1870 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 TP53BP1Q12888 1972 aaPredicted RBP3.33□□□□□ -1.88
RTN4-213ENST00000485749 IGHV1-45A0A0A0MS14 117 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.33□□□□□ -1.88
RTN4-213ENST00000485749 MUC21A0A0G2JKD1 596 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 GRIFINA4D1Z8 144 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 EPM2AB3EWF7 344 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 PEX7O00628 323 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 SIX6O95475 246 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 IGKV1-5P01602 117 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 HBDP02042 147 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 BGLAPP02818 100 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 IGLC2P0DOY2 106 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 IGLC3P0DOY3 106 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 COX7CP15954 63 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 LINC00205P59089 165 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 RPL30P62888 115 aaKnown RBP3.33□□□□□ -1.88
RTN4-213ENST00000485749 EBI3Q14213 229 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 C17orf58Q2M2W7 97 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 STPG1Q5TH74 334 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 FAM53AQ6NSI3 398 aaPredicted RBP3.33□□□□□ -1.88
RTN4-213ENST00000485749 NOXRED1Q6NXP6 359 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 GUSBP11Q6P575 273 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 DPPA3Q6W0C5 159 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 PHF5AQ7RTV0 110 aaKnown RBP3.33□□□□□ -1.88
RTN4-213ENST00000485749 PDPNQ86YL7 162 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 LINC01555Q8NAE3 123 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 VSIG2Q96IQ7 327 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 PMCHL2Q9BQD1 86 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 CLEC7AQ9BXN2 247 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 CCL28Q9NRJ3 127 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms