RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 RPS11P62280 158 aaKnown RBP eCLIP4.01□□□□□ -1.77
CCDC39-205ENST00000485055 TMEM267Q0VDI3 215 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-205ENST00000485055 FCN2Q15485 313 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 TIMM50Q3ZCQ8 353 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 C1orf100Q5SVJ3 147 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 BRD3OSQ6XYD6 125 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 FAM19A3Q7Z5A8 133 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 TCTEX1D1Q8N7M0 179 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 OR4S1Q8NGB4 309 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 SOSTQ9BQB4 213 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 DPM3Q9P2X0 92 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 PXMP4Q9Y6I8 212 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 SONP18583 2426 aaKnown RBP4.01□□□□□ -1.77
CCDC39-205ENST00000485055 SVEP1Q4LDE5 3571 aa4.01□□□□□ -1.77
CCDC39-205ENST00000485055 MDFIC2A0A1B0GVS7 189 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 A6NDN8 102 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 MPC2O95563 127 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 OR2H2O95918 312 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 EVI2AP22794 236 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 FAM222AQ5U5X8 452 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 REG3GQ6UW15 175 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 LINC00173Q6ZV60 143 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 OR51A4Q8NGJ6 313 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 OR2G3Q8NGZ4 309 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 RNF5Q99942 180 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 METTL1Q9UBP6 276 aaKnown RBP4□□□□□ -1.77
CCDC39-205ENST00000485055 SOX21Q9Y651 276 aaPredicted RBP4□□□□□ -1.77
CCDC39-205ENST00000485055 CSPG4Q6UVK1 2322 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 TRAV30A0A087WSZ9 112 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 SMIM26A0A096LP01 95 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 TEX50A0A1B0GTY4 177 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 C12orf77C9JDV5 145 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 BUB1B-PAK6H3BSN5 160 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 H7BYZ3 331 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 SNAPC5O75971 98 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 RPL29P47914 159 aaKnown RBP4□□□□□ -1.77
CCDC39-205ENST00000485055 TAS2R46P59540 309 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 KISS1Q15726 138 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 PYY3Q5JQD4 70 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF497Q6ZNH5 498 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 PPP1R27Q86WC6 154 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 SAMD12Q8N8I0 201 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 OR9G1Q8NH87 305 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 OR5AK2Q8NH90 309 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 RNF185Q96GF1 192 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 PRADC1Q9BSG0 188 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 LSM2Q9Y333 95 aaKnown RBP4□□□□□ -1.77
CCDC39-205ENST00000485055 TRGV10A0A0A0MS01 117 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 ODAMA1E959 279 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 KNCNA6PVL3 124 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 DNASE2O00115 360 aaPredicted RBP4□□□□□ -1.77
CCDC39-205ENST00000485055 BCL2L11O43521 198 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 MRPL3P09001 348 aaKnown RBP4□□□□□ -1.77
CCDC39-205ENST00000485055 SMIM17P0DL12 118 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 BRS3P32247 399 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 POLR2IP36954 125 aaKnown RBP4□□□□□ -1.77
CCDC39-205ENST00000485055 ATP5G3P48201 142 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 H2BFSP57053 126 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 MMDQ15546 238 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 SP6Q3SY56 376 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 GLT8D1Q68CQ7 371 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 LAIR2Q6ISS4 152 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 UFSP1Q6NVU6 142 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 Q6ZS49 121 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 H1FOOQ8IZA3 346 aaPredicted RBP4□□□□□ -1.77
CCDC39-205ENST00000485055 DYNAPQ8N1N2 210 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 PLEKHB2Q96CS7 222 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 SULT4A1Q9BR01 284 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 WASHC3Q9Y3C0 194 aa4□□□□□ -1.77
CCDC39-205ENST00000485055 COL6A5A8TX70 2615 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 H0Y9J4 135 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 TNFSF12O43508 249 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 NDUFC2O95298 119 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 IGHG2P01859 326 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 INAFM2P0DMQ5 153 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF20P17024 532 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 ARFRP1Q13795 201 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 C12orf74Q32Q52 190 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 TMEM69Q5SWH9 247 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 Q5XG85 94 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 LCN12Q6JVE5 192 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 SLC25A26Q70HW3 274 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF767PQ75MW2 155 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 PRNTQ86SH4 94 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 TMEM75Q8N9X5 138 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 PSMG3Q9BT73 122 aaPredicted RBP3.99□□□□□ -1.77
CCDC39-205ENST00000485055 OR5AC2Q9NZP5 309 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 SCP2D1Q9UJQ7 156 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 SMIM31A0A1B0GVY4 71 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 H3BUX3 64 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 HBZP02008 142 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 QRFPP83859 136 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 MSMO1Q15800 293 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 Q499Y3 187 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 LYRM7Q5U5X0 104 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 VN1R17PQ8TDU5 208 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 CHST6Q9GZX3 395 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 Q9H521 79 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 PARP11Q9NR21 331 aa3.99□□□□□ -1.77
CCDC39-205ENST00000485055 MPTX1A8MV57 137 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms