RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 HARBI1Q96MB7 349 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 DKK4Q9UBT3 224 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 ATP1A1-AS1Q5TC04 95 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 SLC25A48Q6ZT89 311 aaKnown RBP9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 WFDC3Q8IUB2 231 aa9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 ZNF71Q9NQZ8 489 aaPredicted RBP9.23□□□□□ -0.93
SEC61A1-205ENST00000483956 NBEAQ8NFP9 2946 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 SRRM4A7MD48 611 aaKnown RBP9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 J3KRW8 73 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 MOSP00540 346 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 IGKV1-16P04430 117 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 GATA4P43694 442 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 MLANAQ16655 118 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 SPRNQ5BIV9 151 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 ZNF562Q6V9R5 426 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 HIGD1BQ9P298 99 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 SLC25A15Q9Y619 301 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 DSCAMO60469 2012 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 TNCP24821 2201 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 DYSFO75923 2080 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 ARL3P36405 182 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 SMCPP49901 116 aaPredicted RBP9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 ZFAND6Q6FIF0 208 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 ITLN1Q8WWA0 313 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 LOC400499M0QZD8 3231 aa9.22□□□□□ -0.93
SEC61A1-205ENST00000483956 TRBV25-1A0A075B6N4 114 aa9.21□□□□□ -0.93
SEC61A1-205ENST00000483956 C12orf74Q32Q52 190 aa9.21□□□□□ -0.93
SEC61A1-205ENST00000483956 LCNL1Q6ZST4 164 aa9.21□□□□□ -0.93
SEC61A1-205ENST00000483956 TECTAO75443 2155 aa9.21□□□□□ -0.93
SEC61A1-205ENST00000483956 TM4SF5O14894 197 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 SAA1P0DJI8 122 aaPredicted RBP9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 PAXXQ9BUH6 204 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 NDUFA4L2Q9NRX3 87 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 RPUSD1Q9UJJ7 312 aaKnown RBP9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 C19orf71A6NCJ1 209 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 NPIPB5A8MRT5 1133 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 HAX1O00165 279 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 RBP4P02753 201 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 DIAPH2-AS1Q14236 149 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 CT83Q5H943 113 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 TEX29Q8N6K0 151 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 OR1L4Q8NGR5 311 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 MLST8Q9BVC4 326 aa9.21□□□□□ -0.94
SEC61A1-205ENST00000483956 SLC25A5P05141 298 aaKnown RBP9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 CD59P13987 128 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 PTH2Q96A98 100 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 DAZAP1Q96EP5 407 aaKnown RBP9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 CFAP47Q6ZTR5 3102 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 COX7A2P2O60397 106 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 MYCNOSP40205 109 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 RRN3P1Q2M238 152 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 ZNF833PQ6ZTB9 187 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 IFI27L1Q96BM0 104 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 GAFA1Q96PS6 74 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 ARRDC1-AS1Q9H2J1 176 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 PROCRQ9UNN8 238 aa9.2□□□□□ -0.94
SEC61A1-205ENST00000483956 IGLV3-9A0A075B6K5 115 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 TRBV20-1A0A075B6N2 111 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 FSTL3O95633 263 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 ARMS2P0C7Q2 107 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 GLRXP35754 106 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 ERHP84090 104 aaKnown RBP9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 C10orf113Q5VZT2 155 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 GFRA4Q9GZZ7 299 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 RNF7Q9UBF6 113 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 LINC01548A6NM66 108 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 PLAUP00749 431 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 CFAP126Q5VTH2 177 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 DUX4L9Q6RFH8 374 aaPredicted RBP9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 ATP6V0E2Q8NHE4 81 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 FXYD5Q96DB9 178 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 KIR2DL4Q99706 377 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 YAE1D1Q9NRH1 226 aa9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 RAI1Q7Z5J4 1906 aaPredicted RBP9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 INTS1Q8N201 2190 aaKnown RBP9.19□□□□□ -0.94
SEC61A1-205ENST00000483956 OVOL3O00110 214 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 PRTN3P24158 256 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 C3orf36Q3SXR2 165 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 FAM201AQ5SY85 155 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 Q71RC1 249 aaPredicted RBP9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 THAP8Q8NA92 274 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 OR5AN1Q8NGI8 311 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 GAGE12JA6NER3 117 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 PCNX2A6NKB5 2137 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 SPRY3O43610 288 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 GAGE7O76087 117 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 GAGE12FP0CL80 117 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 GAGE12GP0CL81 117 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 GAGE12IP0CL82 117 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 CT45A10P0DMU9 189 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 GAGE4Q13068 117 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 PATE2Q6UY27 113 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 CARD19Q96LW7 228 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 KLF12Q9Y4X4 402 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 AGRNO00468 2067 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 RAX2Q96IS3 184 aa9.18□□□□□ -0.94
SEC61A1-205ENST00000483956 IGKV1D-37A0A075B6S9 117 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 A0A1B0GUT8 65 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms