RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 ZNF431Q8TF32 576 aaPredicted RBP0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 PATE1Q8WXA2 126 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 CHCHD1Q96BP2 118 aaKnown RBP0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 LINC00526Q96FQ7 95 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 CACYBPQ9HB71 228 aaKnown RBP0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 TAS2R7Q9NYW3 318 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 MED11Q9P086 117 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 ORMDL1Q9P0S3 153 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 ATPIF1Q9UII2 106 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 OR52A1Q9UKL2 312 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 ZFP30Q9Y2G7 519 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 NISCHQ9Y2I1 1504 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 PEAK1Q9H792 1746 aa0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 NUP210Q8TEM1 1887 aaPredicted RBP0.97□□□□□ -2.25
NSMCE4A-210ENST00000483541 ADGRB2O60241 1585 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 PTPRFP10586 1907 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 TRBV6-4A0A1B0GX49 114 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 MAP1LC3B2A6NCE7 125 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 OR2T8A6NH00 312 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 E7EUB6 86 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 M0R2N4 97 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 INE1O15225 51 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 RER1O15258 196 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 CCL16O15467 120 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 CST7O76096 145 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 FABP1P07148 127 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 RPL35P42766 123 aaKnown RBP0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 DSCR4P56555 118 aaPredicted RBP0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 MSMO1Q15800 293 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 LTC4SQ16873 150 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 RTL8BQ17RB0 113 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 GDF5OSQ5U4N7 250 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 C1orf140Q5VVS0 124 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 DCUN1D2Q6PH85 259 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 ZNF833PQ6ZTB9 187 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 FAM19A2Q8N3H0 131 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 OR2H1Q9GZK4 316 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 CHCHD2Q9Y6H1 151 aaPredicted RBP0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 SIP14410 1827 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 CASP8AP2Q9UKL3 1982 aa0.96□□□□□ -2.26
NSMCE4A-210ENST00000483541 FREM3P0C091 2139 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 MGAMO43451 1857 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 H3BQV1 296 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 CXCL8P10145 99 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 HBBP68871 147 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 TEN1Q86WV5 123 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 GKN2Q86XP6 184 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 OR5AS1Q8N127 324 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 LRRC18Q8N456 261 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 RAB37Q96AX2 223 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 BORCS8Q96FH0 119 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 GGACTQ9BVM4 153 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 CENPHQ9H3R5 247 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 C22orf24Q9Y442 160 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 TECPR2O15040 1411 aa0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 ASCC3Q8N3C0 2202 aaKnown RBP0.95□□□□□ -2.26
NSMCE4A-210ENST00000483541 hDV103S1A0JD37 113 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 F8W1H4 67 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 LYRM1O43325 122 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 ZNF25P17030 456 aaPredicted RBP0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 C1orf134Q5TEV5 83 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 ARPINQ7Z6K5 226 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 HYLS1Q96M11 299 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 LINC00052Q96N35 136 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 TMEM14CQ9P0S9 112 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 NUBP2Q9Y5Y2 271 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 FRMPD1Q5SYB0 1578 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 COL24A1Q17RW2 1714 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 UNC13AQ9UPW8 1703 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 E9PCH4 1651 aa0.94□□□□□ -2.26
NSMCE4A-210ENST00000483541 TRAV27A0A087WT01 109 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 IGHV1-58A0A0C4DH39 117 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 TRDV1A0A1B0GX56 115 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 B4DSR2 109 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 E7EQ34 232 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 H3BRM9 83 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 PGRMC1O00264 195 aaKnown RBP0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 MT-ND6P03923 174 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 TMEM78Q5T7P6 136 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 SMIM15Q7Z3B0 74 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 PRR15Q8IV56 129 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 ISOC1Q96CN7 298 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 CCDC32Q9BV29 185 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 LAMTOR2Q9Y2Q5 125 aa0.93□□□□□ -2.26
NSMCE4A-210ENST00000483541 CECR2Q9BXF3 1484 aa0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 TRAPPC8Q9Y2L5 1435 aa0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 A0A087WSZ3 146 aa0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 KPNA4O00629 521 aaPredicted RBP0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 CCL25O15444 150 aa0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 FAM107AO95990 144 aa0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 IFNA21P01568 189 aa0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 IGLV1-51P01701 117 aa0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 COX7CP15954 63 aa0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 TFAMQ00059 246 aaKnown RBP0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 EIF3IQ13347 325 aaKnown RBP0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 CIRBPQ14011 172 aaKnown RBP0.92□□□□□ -2.26
NSMCE4A-210ENST00000483541 SPRNQ5BIV9 151 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms