RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 ZNF705GA8MUZ8 300 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-217ENST00000483442 TMEM14DPA8MWL7 114 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 TNFSF12O43508 249 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 GNG7O60262 68 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 TSPAN13O95857 204 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 LALBAP00709 142 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 ATP5G1P05496 136 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 UBBP0CG47 229 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 LIMS3P0CW19 117 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 LIMS4P0CW20 117 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 NFYAP23511 347 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-217ENST00000483442 ATP5G3P48201 142 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 WT1-ASQ06250 92 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 TIMM50Q3ZCQ8 353 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 OGFRL1Q5TC84 451 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-217ENST00000483442 GDF5OSQ5U4N7 250 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 TMPRSS11AQ6ZMR5 421 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 HOGA1Q86XE5 327 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 H1FOOQ8IZA3 346 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-217ENST00000483442 C1orf158Q8N1D5 194 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 ZNF680Q8NEM1 530 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 OR4B1Q8NGF8 309 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 DTD1Q8TEA8 209 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 GNPNAT1Q96EK6 184 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-217ENST00000483442 LINC00479Q96M42 142 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 ATP5SQ99766 215 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 TMEM208Q9BTX3 173 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 TMEM70Q9BUB7 260 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 ACTR3CQ9C0K3 210 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-217ENST00000483442 LPAR5Q9H1C0 372 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 S100A14Q9HCY8 104 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 BET1LQ9NYM9 111 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 TAS2R8Q9NYW2 309 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 ELF5Q9UKW6 265 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-217ENST00000483442 GOLT1BQ9Y3E0 138 aa2.38□□□□□ -2.03
LRCH3-217ENST00000483442 F11RQ9Y624 299 aaKnown RBP2.38□□□□□ -2.03
LRCH3-217ENST00000483442 IGKV1D-8A0A087WSZ0 117 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 IGKV1D-13A0A0B4J2D9 117 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 TCRBV3S1A0A5B6 114 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 LYRM9A8MSI8 78 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 I3L2K1 104 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 SULT1C2O00338 296 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 DENRO43583 198 aaKnown RBP2.37□□□□□ -2.03
LRCH3-217ENST00000483442 MT-CO2P00403 227 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 HLA-DQB1P01920 261 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 FCGR3AP08637 254 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 IGKV1-13P0DP09 117 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 CD36P16671 472 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 RANBP1P43487 201 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 SNRPD3P62318 126 aaKnown RBP2.37□□□□□ -2.03
LRCH3-217ENST00000483442 QRFPP83859 136 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 SRSF9Q13242 221 aaKnown RBP eCLIP2.37□□□□□ -2.03
LRCH3-217ENST00000483442 FLOT2Q14254 428 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 INSL4Q14641 139 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 MEF2DQ14814 521 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 KRTAP13-3Q3SY46 172 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 RBM48Q5RL73 367 aaKnown RBP2.37□□□□□ -2.03
LRCH3-217ENST00000483442 C1orf100Q5SVJ3 147 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 ADAMTSL4-AS1Q5T5F5 129 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 ZNF773Q6PK81 442 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 CMTM1Q8IZ96 169 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 LINC01561Q8N1V8 128 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 OR1L8Q8NGR8 309 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 LYPD6BQ8NI32 183 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 LGALS14Q8TCE9 139 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 BAALCQ8WXS3 180 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 TMEM230Q96A57 120 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 SMIM19Q96E16 107 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 NARS2Q96I59 477 aaKnown RBP2.37□□□□□ -2.03
LRCH3-217ENST00000483442 PGLYRP3Q96LB9 341 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 PACRGQ96M98 296 aaPredicted RBP2.37□□□□□ -2.03
LRCH3-217ENST00000483442 LINC00052Q96N35 136 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 DERL3Q96Q80 235 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 METTL26Q96S19 204 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 HSD17B10Q99714 261 aaKnown RBP2.37□□□□□ -2.03
LRCH3-217ENST00000483442 OPRPNQ99935 248 aaPredicted RBP2.37□□□□□ -2.03
LRCH3-217ENST00000483442 UPK3BQ9BT76 320 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 CABLES2Q9BTV7 478 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 GABARAPL3Q9BY60 117 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 SLC35B3Q9H1N7 401 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 OR51M1Q9H341 326 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 NDUFA4L2Q9NRX3 87 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 RHBDL2Q9NX52 303 aa2.37□□□□□ -2.03
LRCH3-217ENST00000483442 MRPS16Q9Y3D3 137 aaKnown RBP2.37□□□□□ -2.03
LRCH3-217ENST00000483442 NDUFAF8A1L188 74 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 FOXI3A8MTJ6 420 aaPredicted RBP2.36□□□□□ -2.03
LRCH3-217ENST00000483442 K7EN84 100 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 GOSR2O14653 212 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 EI24O14681 340 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 SLC22A5O76082 557 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 HPRT1P00492 218 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 CDK1P06493 297 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 CTXN2P0C2S0 81 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 HLA-DRB4P13762 266 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 HTN1P15515 57 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 GATA2P23769 480 aaPredicted RBP2.36□□□□□ -2.03
LRCH3-217ENST00000483442 CRYBB3P26998 211 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 TALDO1P37837 337 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 ALDH3B2P48448 385 aa2.36□□□□□ -2.03
LRCH3-217ENST00000483442 EIF2B2P49770 351 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms