RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 MRPS16Q9Y3D3 137 aaKnown RBP9.14□□□□□ -0.95
SMPD4-218ENST00000482171 DLX6P56179 175 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 MAJINQ3KP22 176 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 OCIAD2Q56VL3 154 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 TEX43Q6ZNM6 134 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 Q8TCH9 128 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 RNF125Q96EQ8 232 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 SHISA9B4DS77 424 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 C18orf32Q8TCD1 76 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 TPSG1Q9NRR2 321 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 CTSZQ9UBR2 303 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 SYS1-DBNDD2H3BUS1 97 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 RNASE2P10153 161 aaKnown RBP9.13□□□□□ -0.95
SMPD4-218ENST00000482171 RCHY1Q96PM5 261 aa9.13□□□□□ -0.95
SMPD4-218ENST00000482171 ARHGAP32A7KAX9 2087 aa9.12□□□□□ -0.95
SMPD4-218ENST00000482171 A0A1W2PPI3 338 aa9.12□□□□□ -0.95
SMPD4-218ENST00000482171 IGLL1P15814 213 aa9.12□□□□□ -0.95
SMPD4-218ENST00000482171 RPL13AP40429 203 aaKnown RBP9.12□□□□□ -0.95
SMPD4-218ENST00000482171 FXYD7P58549 80 aa9.12□□□□□ -0.95
SMPD4-218ENST00000482171 LSM4Q9Y4Z0 139 aaKnown RBP9.12□□□□□ -0.95
SMPD4-218ENST00000482171 SRRM4A7MD48 611 aaKnown RBP9.12□□□□□ -0.95
SMPD4-218ENST00000482171 CRIP3Q6Q6R5 217 aa9.12□□□□□ -0.95
SMPD4-218ENST00000482171 EPG5Q9HCE0 2579 aa9.12□□□□□ -0.95
SMPD4-218ENST00000482171 SCRT1Q9BWW7 348 aa9.12□□□□□ -0.95
SMPD4-218ENST00000482171 MRPL27Q9P0M9 148 aaKnown RBP9.12□□□□□ -0.95
SMPD4-218ENST00000482171 SOX21Q9Y651 276 aaPredicted RBP9.12□□□□□ -0.95
SMPD4-218ENST00000482171 NAV3Q8IVL0 2385 aa9.12□□□□□ -0.95
SMPD4-218ENST00000482171 C2CD3Q4AC94 2353 aa9.12□□□□□ -0.95
SMPD4-218ENST00000482171 RPL15P61313 204 aaKnown RBP9.11□□□□□ -0.95
SMPD4-218ENST00000482171 SEC11AP67812 179 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 GUSBP1Q15486 140 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 C5orf64Q2M2E5 130 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 C3orf36Q3SXR2 165 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 C11orf44Q8N8P7 122 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 ITGB1BP1O14713 200 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 SAA4P35542 130 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 FAM106AQ4KMX7 169 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 ORMDL3Q8N138 153 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 FOXC2Q99958 501 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 LY96Q9Y6Y9 160 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 TRBV20OR9-2A0A075B6H5 130 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 HERVK_113P61574 105 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 SLAQ13239 276 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 TEX36Q5VZQ5 186 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 TTC9CQ8N5M4 171 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 OR10J6PQ8NGY7 276 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 RNASE8Q8TDE3 154 aaKnown RBP9.11□□□□□ -0.95
SMPD4-218ENST00000482171 CHCHD1Q96BP2 118 aaKnown RBP9.11□□□□□ -0.95
SMPD4-218ENST00000482171 FMC1Q96HJ9 113 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 GTSF1LQ9H1H1 148 aa9.11□□□□□ -0.95
SMPD4-218ENST00000482171 A0A0G2JLM5 398 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 H3BUX3 64 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 PLA2G5P39877 138 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 ZNF418Q8TF45 676 aaPredicted RBP9.1□□□□□ -0.95
SMPD4-218ENST00000482171 TRAV8-1A0A0A6YYK1 113 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 PMS2P5A8MQ11 134 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 M0R3E3 92 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 CCL25O15444 150 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 PRTN3P24158 256 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 C15orf32Q32M92 178 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 RUSC1-AS1Q66K80 236 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 Q6ZPA2 131 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 JMJD1CQ15652 2540 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 TMEM238LA0A1B0GVL6 79 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 A6NJY4 79 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 PRB1P04280 392 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 EXOC3-AS1Q8N2X6 119 aa9.1□□□□□ -0.95
SMPD4-218ENST00000482171 HIVEP2P31629 2446 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 OR11H1Q8NG94 326 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 OR1N2Q8NGR9 330 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 TMEM14BQ9NUH8 114 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 V9GYV3 84 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 FASNP49327 2511 aaKnown RBP9.09□□□□□ -0.95
SMPD4-218ENST00000482171 C22orf46C9J442 243 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 CIARTQ8N365 385 aaPredicted RBP9.09□□□□□ -0.95
SMPD4-218ENST00000482171 MS4A6AQ9H2W1 248 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 EML5Q05BV3 1969 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 PSG9Q00887 426 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 SIGMAR1Q99720 223 aa9.09□□□□□ -0.95
SMPD4-218ENST00000482171 SORL1Q92673 2214 aa9.09□□□□□ -0.96
SMPD4-218ENST00000482171 IGHV3OR16-12A0A075B7B8 117 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 ID1P41134 155 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 ATP5L2Q7Z4Y8 100 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 ZNF329Q86UD4 541 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 ASCL2Q99929 193 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 MRPL16Q9NX20 251 aaKnown RBP9.08□□□□□ -0.96
SMPD4-218ENST00000482171 ABCA12Q86UK0 2595 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 CD5LO43866 347 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 SRD5A1P18405 259 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 VDAC2P45880 294 aaPredicted RBP9.08□□□□□ -0.96
SMPD4-218ENST00000482171 OR5AN1Q8NGI8 311 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 WT1-ASQ06250 92 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 GLMPQ8WWB7 406 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 NPFFO15130 113 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 IGFL4Q6B9Z1 124 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 IFI27L1Q96BM0 104 aa9.08□□□□□ -0.96
SMPD4-218ENST00000482171 POLQO75417 2590 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms