RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TRAPPC8Q9Y2L5 1435 aa2□□□□□ -2.09
SF3B1-210ENST00000482158 MYH1P12882 1939 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 CCDC180Q9P1Z9 1646 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 NRKQ7Z2Y5 1582 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 TMEM235A6NFC5 223 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 ZNF860A6NHJ4 632 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 TAX1BP3O14907 124 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 IGHV1-69P01742 117 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 SRP19P09132 144 aaKnown RBP1.99□□□□□ -2.09
SF3B1-210ENST00000482158 ZNF705DP0CH99 300 aaPredicted RBP1.99□□□□□ -2.09
SF3B1-210ENST00000482158 AKAIN1P0CW23 69 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 TMBIM6P55061 237 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 HOXC5Q00444 222 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 RRN3P1Q2M238 152 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 HSD17B12Q53GQ0 312 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 AMTNQ6UX39 209 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 OR4C12Q96R67 309 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 SDF2Q99470 211 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 METTL1Q9UBP6 276 aaKnown RBP1.99□□□□□ -2.09
SF3B1-210ENST00000482158 RNF11Q9Y3C5 154 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 TANC2Q9HCD6 1990 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 A2ML1A8K2U0 1454 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 MUC6Q6W4X9 2439 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 NAIPQ13075 1403 aa1.99□□□□□ -2.09
SF3B1-210ENST00000482158 KIDINS220Q9ULH0 1771 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 DSPPQ9NZW4 1301 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 A0A0D9SEW6 157 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 FAM236AA0A1B0GUQ0 79 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 FAM236BA0A1B0GV22 79 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 IRGMA1A4Y4 181 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 ODAMA1E959 279 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 C9JCJ5 164 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 BUB1B-PAK6H3BSN5 160 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 CCDC179H3BU77 68 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 M0R378 163 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 UBE2L6O14933 153 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 OR2T1O43869 369 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 SNAPC5O75971 98 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 MPC2O95563 127 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 PRB1P04280 392 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 PSMB8P28062 276 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 CASP1P29466 404 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 BRS3P32247 399 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 SDC2P34741 201 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 GUCA1AP43080 201 aaPredicted RBP1.98□□□□□ -2.09
SF3B1-210ENST00000482158 XCL1P47992 114 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 HSD52Q0P140 79 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 MSMO1Q15800 293 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 LGALS9BQ3B8N2 356 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 PABPC1L2AQ5JQF8 200 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 COL5A1-AS1Q5SY13 56 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 SPATA12Q7Z6I5 190 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 MMGT1Q8N4V1 131 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 OR4S1Q8NGB4 309 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 OR5D14Q8NGL3 314 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 CLDND2Q8NHS1 167 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 PPTC7Q8NI37 304 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 BRK1Q8WUW1 75 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 CKLFQ9UBR5 152 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 SCP2D1Q9UJQ7 156 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 PXDNLA1KZ92 1463 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 KIAA1107Q9UPP5 1409 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 DOCK10Q96BY6 2186 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 GLI3P10071 1580 aa1.98□□□□□ -2.09
SF3B1-210ENST00000482158 BAZ1AQ9NRL2 1556 aaPredicted RBP1.98□□□□□ -2.09
SF3B1-210ENST00000482158 MYH8P13535 1937 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HEATR5AQ86XA9 2040 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 IGHV1-58A0A0C4DH39 117 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 C7orf71A4D174 169 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 MEIS3P1A6NDR6 274 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 TMEM256-PLSCR3K7ERE1 68 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 CDC42EP2O14613 210 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 FABP2P12104 132 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 CRYGSP22914 178 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HIST1H2BOP23527 126 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HIST1H2BBP33778 126 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 RPL22P35268 128 aaKnown RBP1.97□□□□□ -2.09
SF3B1-210ENST00000482158 FOXA3P55318 350 aaPredicted RBP1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HIST1H2BDP58876 126 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HIST1H2BCP62807 126 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 CCL20P78556 96 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 PLGLB1Q02325 96 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 DIAPH2-AS1Q14236 149 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HIST2H2BEQ16778 126 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 MEIG1Q5JSS6 88 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.97□□□□□ -2.09
SF3B1-210ENST00000482158 LCN15Q6UWW0 184 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 GTF2H5Q6ZYL4 71 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 SSX8Q7RTT4 187 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 LINC00305Q7Z4B0 112 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 GKN2Q86XP6 184 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 TEX29Q8N6K0 151 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 PACRGLQ8N7B6 248 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 STAG3L4Q8TBR4 150 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HIST1H2BHQ93079 126 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HIST1H2BNQ99877 126 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 HIST1H2BMQ99879 126 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 TMEM191AQ9H0A3 160 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 TCEAL2Q9H3H9 227 aaPredicted RBP1.97□□□□□ -2.09
SF3B1-210ENST00000482158 BANF2Q9H503 90 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms