RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 GAGE12HA6NDE8 117 aa13.33□□□□□ -0.28
SH3D21-203ENST00000480549 TEX22C9J3V5 150 aa13.33□□□□□ -0.28
SH3D21-203ENST00000480549 HLA-DQA1P01909 254 aa13.33□□□□□ -0.28
SH3D21-203ENST00000480549 CRYBB3P26998 211 aa13.33□□□□□ -0.28
SH3D21-203ENST00000480549 LINC00173Q6ZV60 143 aa13.33□□□□□ -0.28
SH3D21-203ENST00000480549 VMO1Q7Z5L0 202 aa13.33□□□□□ -0.28
SH3D21-203ENST00000480549 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.28
SH3D21-203ENST00000480549 C9orf118A6NHY6 69 aa13.33□□□□□ -0.28
SH3D21-203ENST00000480549 ACTL6BO94805 426 aa13.33□□□□□ -0.28
SH3D21-203ENST00000480549 IGKV1D-37A0A075B6S9 117 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 PSMB11A5LHX3 300 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 RUSC1-AS1Q66K80 236 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 EAF1Q96JC9 268 aaPredicted RBP13.32□□□□□ -0.28
SH3D21-203ENST00000480549 GEMIN7Q9H840 131 aaKnown RBP13.32□□□□□ -0.28
SH3D21-203ENST00000480549 ASH1LQ9NR48 2969 aaKnown RBP13.32□□□□□ -0.28
SH3D21-203ENST00000480549 IGHV3-48P01763 117 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 PMCHL2Q9BQD1 86 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 YTHDF2Q9Y5A9 579 aaKnown RBP13.32□□□□□ -0.28
SH3D21-203ENST00000480549 SPCS1Q9Y6A9 102 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 APELAP0DMC3 54 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 ASPHD1Q5U4P2 390 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 SHISA2Q6UWI4 295 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 THAP8Q8NA92 274 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 NPIPB3Q92617 1050 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 SIRPDQ9H106 197 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 SCRT2Q9NQ03 307 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 TNFRSF19Q9NS68 423 aa13.32□□□□□ -0.28
SH3D21-203ENST00000480549 A0A1W2PRD5 423 aa13.31□□□□□ -0.28
SH3D21-203ENST00000480549 A0A1W2PRF3 423 aa13.31□□□□□ -0.28
SH3D21-203ENST00000480549 A0A1W2PRM7 423 aa13.31□□□□□ -0.28
SH3D21-203ENST00000480549 CRYGCP07315 174 aa13.31□□□□□ -0.28
SH3D21-203ENST00000480549 HIST1H1EP10412 219 aaKnown RBP13.31□□□□□ -0.28
SH3D21-203ENST00000480549 HOXB4P17483 251 aaPredicted RBP13.31□□□□□ -0.28
SH3D21-203ENST00000480549 BLNKQ8WV28 456 aa13.31□□□□□ -0.28
SH3D21-203ENST00000480549 TIMM8BQ9Y5J9 83 aaPredicted RBP13.31□□□□□ -0.28
SH3D21-203ENST00000480549 A0A0G2JLM5 398 aa13.31□□□□□ -0.28
SH3D21-203ENST00000480549 TMEM97Q5BJF2 176 aa13.31□□□□□ -0.28
SH3D21-203ENST00000480549 ZNF331Q9NQX6 463 aaPredicted RBP13.31□□□□□ -0.28
SH3D21-203ENST00000480549 CA1P00915 261 aaPredicted RBP13.3□□□□□ -0.28
SH3D21-203ENST00000480549 SMIM17P0DL12 118 aa13.3□□□□□ -0.28
SH3D21-203ENST00000480549 SRSF12Q8WXF0 261 aaKnown RBP13.3□□□□□ -0.28
SH3D21-203ENST00000480549 ZNF503Q96F45 646 aa13.3□□□□□ -0.28
SH3D21-203ENST00000480549 TXNDC17Q9BRA2 123 aa13.3□□□□□ -0.28
SH3D21-203ENST00000480549 BPESC1Q9GZL8 116 aa13.3□□□□□ -0.28
SH3D21-203ENST00000480549 LMO4P61968 165 aa13.3□□□□□ -0.28
SH3D21-203ENST00000480549 DYNAPQ8N1N2 210 aa13.3□□□□□ -0.28
SH3D21-203ENST00000480549 C19orf24Q9BVV8 132 aa13.3□□□□□ -0.28
SH3D21-203ENST00000480549 TCRBV4S1A1TA0A5B7 111 aa13.3□□□□□ -0.28
SH3D21-203ENST00000480549 CD300EQ496F6 205 aaPredicted RBP13.3□□□□□ -0.28
SH3D21-203ENST00000480549 BPIFA4PQ86YQ2 179 aa13.3□□□□□ -0.28
SH3D21-203ENST00000480549 CD24P25063 80 aa13.29□□□□□ -0.28
SH3D21-203ENST00000480549 NPBQ8NG41 125 aa13.29□□□□□ -0.28
SH3D21-203ENST00000480549 NBR2O15453 112 aa13.29□□□□□ -0.28
SH3D21-203ENST00000480549 NDUFA3O95167 84 aa13.29□□□□□ -0.28
SH3D21-203ENST00000480549 F11RQ9Y624 299 aaKnown RBP13.29□□□□□ -0.28
SH3D21-203ENST00000480549 SYS1-DBNDD2H3BUS1 97 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 MOSP00540 346 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 IGHV4-39P01824 125 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 SLC25A33Q9BSK2 321 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 SS18L2Q9UHA2 77 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 ACACBO00763 2458 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 ISLRO14498 428 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 SEC11AP67812 179 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 PLGLAQ15195 96 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 PQLC2Q6ZP29 291 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 SSBP4Q9BWG4 385 aaPredicted RBP13.28□□□□□ -0.28
SH3D21-203ENST00000480549 TMEM191AQ9H0A3 160 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 CENPWQ5EE01 88 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 MORN5Q5VZ52 161 aa13.28□□□□□ -0.28
SH3D21-203ENST00000480549 H3BRM9 83 aa13.27□□□□□ -0.28
SH3D21-203ENST00000480549 GNG4P50150 75 aa13.27□□□□□ -0.28
SH3D21-203ENST00000480549 KIR3DS1Q14943 382 aa13.27□□□□□ -0.28
SH3D21-203ENST00000480549 COX19Q49B96 90 aa13.27□□□□□ -0.28
SH3D21-203ENST00000480549 C2orf91Q6ZV80 131 aa13.27□□□□□ -0.29
SH3D21-203ENST00000480549 MRPL32Q9BYC8 188 aaKnown RBP13.27□□□□□ -0.29
SH3D21-203ENST00000480549 VPS13CQ709C8 3753 aa13.27□□□□□ -0.29
SH3D21-203ENST00000480549 MINOS1Q5TGZ0 78 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 PATE2Q6UY27 113 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 TMEM116Q8NCL8 245 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 FAM167A-AS1Q96KT0 104 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 SRSF8Q9BRL6 282 aaKnown RBP13.26□□□□□ -0.29
SH3D21-203ENST00000480549 MINOS1-NBL1R4GNA1 71 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 TCTAP57738 103 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 SLC25A2Q9BXI2 301 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 USP24Q9UPU5 2620 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 COL12A1Q99715 3063 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 A6NDN8 102 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 OOSP1A8MZH6 123 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 C8orf88P0DMB2 117 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 TMEM167BQ9NRX6 74 aa13.26□□□□□ -0.29
SH3D21-203ENST00000480549 SVEP1Q4LDE5 3571 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 Q8N6K4 173 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 OR5A1Q8NGJ0 315 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 MRAP2Q96G30 205 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 IGHV3-21A0A0B4J1V1 117 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 TRAV5A0A0B4J249 113 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 HLA-DRB1P01911 266 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 GATA3P23771 443 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 CAMPP49913 170 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 TAS2R45P59539 299 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms