RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ZNF785A8K8V0 405 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 ZNF705EA8MWA4 302 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 H3BQ15 152 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 K7EQG2 157 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 GCHFRP30047 84 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 PAFAH1B2P68402 229 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 BLOC1S1P78537 153 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 IFITM2Q01629 132 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 LYPD6BQ8NI32 183 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 ZNF256Q9Y2P7 627 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 ARL2-SNX15V9GYD0 113 aa9.41□□□□□ -0.9
TRAPPC12-218ENST00000479897 TEX46H3BTG2 121 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 ISLRO14498 428 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 HMGB3O15347 200 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 EIF3GO75821 320 aaKnown RBP eCLIP9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 HBE1P02100 147 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 OR10J4P0C629 311 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 NBEAP1P0C6P0 100 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 PSMB3P49720 205 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 BEAN1Q3B7T3 259 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 SFT2D1Q8WV19 159 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 FAM110AQ9BQ89 295 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 ZNF586Q9NXT0 402 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 CLEC5AQ9NY25 188 aa9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 ZMAT5Q9UDW3 170 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-218ENST00000479897 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
TRAPPC12-218ENST00000479897 RGS13O14921 159 aa9.39□□□□□ -0.91
TRAPPC12-218ENST00000479897 NDUFB4O95168 129 aa9.39□□□□□ -0.91
TRAPPC12-218ENST00000479897 RPL11P62913 178 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-218ENST00000479897 PMS2P11Q13670 270 aa9.39□□□□□ -0.91
TRAPPC12-218ENST00000479897 OXLD1Q5BKU9 147 aa9.39□□□□□ -0.91
TRAPPC12-218ENST00000479897 LYPD1Q8N2G4 141 aa9.39□□□□□ -0.91
TRAPPC12-218ENST00000479897 ZNF331Q9NQX6 463 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC12-218ENST00000479897 SELENOKQ9Y6D0 94 aa9.39□□□□□ -0.91
TRAPPC12-218ENST00000479897 DNASE2O00115 360 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-218ENST00000479897 SLC17A3O00476 420 aa9.38□□□□□ -0.91
TRAPPC12-218ENST00000479897 NMBP08949 121 aa9.38□□□□□ -0.91
TRAPPC12-218ENST00000479897 PPT1P50897 306 aa9.38□□□□□ -0.91
TRAPPC12-218ENST00000479897 FGF8P55075 233 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-218ENST00000479897 PSG9Q00887 426 aa9.38□□□□□ -0.91
TRAPPC12-218ENST00000479897 KPRPQ5T749 579 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-218ENST00000479897 IGKV3-7A0A075B6H7 116 aa9.37□□□□□ -0.91
TRAPPC12-218ENST00000479897 TRAV8-2A0A0B4J237 113 aa9.37□□□□□ -0.91
TRAPPC12-218ENST00000479897 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
TRAPPC12-218ENST00000479897 ID1P41134 155 aa9.37□□□□□ -0.91
TRAPPC12-218ENST00000479897 GUCA2BQ16661 112 aa9.37□□□□□ -0.91
TRAPPC12-218ENST00000479897 GBGT1Q8N5D6 347 aa9.37□□□□□ -0.91
TRAPPC12-218ENST00000479897 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-218ENST00000479897 C16orf92Q96LL3 132 aa9.37□□□□□ -0.91
TRAPPC12-218ENST00000479897 TMPRSS5Q9H3S3 457 aa9.37□□□□□ -0.91
TRAPPC12-218ENST00000479897 G3V4G9 280 aa9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 H3BTX0 84 aa9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 CMC4P56277 68 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 SNRPD3P62318 126 aaKnown RBP9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 ODF3L2Q3SX64 289 aa9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 FAM24BQ8N5W8 94 aa9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 ARL6IP6Q8N6S5 226 aa9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 BLNKQ8WV28 456 aa9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 NKX6-2Q9C056 277 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 MANBALQ9NQG1 85 aa9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 PRELID1Q9Y255 219 aa9.36□□□□□ -0.91
TRAPPC12-218ENST00000479897 NBEAL1Q6ZS30 2694 aa9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 SNRPCP09234 159 aaKnown RBP9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 TAGLN2P37802 199 aaKnown RBP9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 TFPI2P48307 235 aa9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 CLLU1Q5K131 121 aa9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 IQCF2Q8IXL9 164 aa9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 Q9H3A6 140 aa9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 MAP6D1Q9H9H5 199 aa9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 OTORQ9NRC9 128 aa9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 C19orf73Q9NVV2 129 aa9.35□□□□□ -0.91
TRAPPC12-218ENST00000479897 FAM74A7A6NL05 159 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 IFNA1P01562 189 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 ZNF688P0C7X2 276 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 KRTAP10-11P60412 298 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 CCL20P78556 96 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 PSG3Q16557 428 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 GTSCR1Q86UQ5 136 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 WFDC3Q8IUB2 231 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 TXNDC17Q9BRA2 123 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 TCEAL7Q9BRU2 100 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 YTHDF2Q9Y5A9 579 aaKnown RBP9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 NOTCH1P46531 2555 aa9.34□□□□□ -0.91
TRAPPC12-218ENST00000479897 A0A1B0GV50 99 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 OR11H12B2RN74 326 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 CD7P09564 240 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 BCL2P10415 239 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 CD81P60033 236 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 RAB14P61106 215 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 RANP62826 216 aaKnown RBP9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 ICAM4Q14773 271 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 PSMG4Q5JS54 123 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 EXOC3-AS1Q8N2X6 119 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 RNF182Q8N6D2 247 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 C5orf17Q8NAS9 161 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 C20orf173Q96LM9 149 aa9.33□□□□□ -0.92
TRAPPC12-218ENST00000479897 PAGE4O60829 102 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms