RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 DEFB116Q30KQ4 102 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 HACD4Q5VWC8 232 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 ZNF660Q6AZW8 331 aaPredicted RBP3.31□□□□□ -1.88
UPF3A-205ENST00000479712 PDPNQ86YL7 162 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 ARRDC1Q8N5I2 433 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 TCTEX1D1Q8N7M0 179 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 OR10J5Q8NHC4 309 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 UBALD1Q8TB05 177 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 MYOZ3Q8TDC0 251 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 YIPF6Q96EC8 236 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 ADTRPQ96IZ2 230 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 MRPL20Q9BYC9 149 aaKnown RBP3.31□□□□□ -1.88
UPF3A-205ENST00000479712 OR51E2Q9H255 320 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 RHBDL2Q9NX52 303 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 WASHC3Q9Y3C0 194 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 IGHV3-72A0A0B4J1Y9 119 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 ZNF736B4DX44 427 aaPredicted RBP3.3□□□□□ -1.88
UPF3A-205ENST00000479712 ZNF701M0R085 212 aaPredicted RBP3.3□□□□□ -1.88
UPF3A-205ENST00000479712 MPDU1O75352 247 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 OXTP01178 125 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 APOA2P02652 100 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 SCTP09683 121 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 PMCHP20382 165 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 TALDO1P37837 337 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 CBX5P45973 191 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 REG1BP48304 166 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 RUNX1Q01196 453 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 MMDQ15546 238 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 NEDD8Q15843 81 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 CDNFQ49AH0 187 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 FAM131AQ6UXB0 335 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 SPATA12Q7Z6I5 190 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 H1FOOQ8IZA3 346 aaPredicted RBP3.3□□□□□ -1.88
UPF3A-205ENST00000479712 C15orf56Q8N910 161 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 C11orf72Q8NBR9 251 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 OR11H7Q8NGC8 314 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 LGALS14Q8TCE9 139 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 ISOC2Q96AB3 205 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 TIMM17AQ99595 171 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 TSNAXQ99598 290 aaKnown RBP3.3□□□□□ -1.88
UPF3A-205ENST00000479712 ATG5Q9H1Y0 275 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 DIABLOQ9NR28 239 aa3.3□□□□□ -1.88
UPF3A-205ENST00000479712 IGLV1-50A0A075B6I6 118 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 TRAV6A0A075B6T7 132 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 LOC100506127A0A0U1RQW1 187 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 H3BUA1 57 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 CREBL2O60519 120 aaPredicted RBP3.29□□□□□ -1.88
UPF3A-205ENST00000479712 HLA-DQB1P01920 261 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 MBP02144 154 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 APOA1P02647 267 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 PSMB8P28062 276 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 SYNJ2BPP57105 145 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 GNG2P59768 71 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 HAMPP81172 84 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 TMEM267Q0VDI3 215 aaPredicted RBP3.29□□□□□ -1.88
UPF3A-205ENST00000479712 RTL8BQ17RB0 113 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 DEFB136Q30KP8 78 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 AKIRIN2Q53H80 203 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 RPL39P5Q59GN2 51 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 GCSAMLQ5JQS6 135 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 UBE2NLQ5JXB2 153 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 ZFP2Q6ZN57 461 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 ZNF695Q8IW36 515 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 CYB561D1Q8N8Q1 229 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 OR8U1Q8NH10 309 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 C4orf3Q8WVX3 66 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 ACOT12Q8WYK0 555 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 BORCS5Q969J3 196 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 SLC25A46Q96AG3 418 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 FLYWCH2Q96CP2 140 aaKnown RBP3.29□□□□□ -1.88
UPF3A-205ENST00000479712 S100A16Q96FQ6 103 aaKnown RBP3.29□□□□□ -1.88
UPF3A-205ENST00000479712 ABHD14BQ96IU4 210 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 UBE2E2Q96LR5 201 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 SDHCQ99643 169 aaPredicted RBP3.29□□□□□ -1.88
UPF3A-205ENST00000479712 GINS4Q9BRT9 223 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 OR2D2Q9H210 308 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 SDHAF2Q9NX18 166 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 ANXA10Q9UJ72 324 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 ANAPC10Q9UM13 185 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 NUBP2Q9Y5Y2 271 aa3.29□□□□□ -1.88
UPF3A-205ENST00000479712 IGLV2-18A0A075B6J9 118 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 TRAV41A0A0B4J266 112 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 TMEM235A6NFC5 223 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 H7C2Y5 167 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 M0R1X1 148 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 SULT1C2O00338 296 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 BET1O15155 118 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 RBFOX2O43251 390 aaKnown RBP eCLIP3.28□□□□□ -1.88
UPF3A-205ENST00000479712 CRYGCP07315 174 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 OR8U9P0C7N5 309 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 RAB5AP20339 215 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 PFN2P35080 140 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 ARPC4P59998 168 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 UBE2KP61086 200 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 EIF4EBP1Q13541 118 aaPredicted RBP3.28□□□□□ -1.88
UPF3A-205ENST00000479712 VMA21Q3ZAQ7 101 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 IDNKQ5T6J7 187 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 SGPP2Q8IWX5 399 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 OR5H6Q8NGV6 325 aa3.28□□□□□ -1.88
UPF3A-205ENST00000479712 C15orf40Q8WUR7 153 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms