RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 FAM24BQ8N5W8 94 aa13.11□□□□□ -0.31
HLA-A-206ENST00000479320 NPIPB3Q92617 1050 aa13.11□□□□□ -0.31
HLA-A-206ENST00000479320 CSTL1Q9H114 145 aa13.11□□□□□ -0.31
HLA-A-206ENST00000479320 A0A0J9YWU9 116 aa13.1□□□□□ -0.31
HLA-A-206ENST00000479320 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
HLA-A-206ENST00000479320 DEFB131AP59861 70 aa13.1□□□□□ -0.31
HLA-A-206ENST00000479320 DPPA3Q6W0C5 159 aa13.1□□□□□ -0.31
HLA-A-206ENST00000479320 TMEM242Q9NWH2 141 aa13.1□□□□□ -0.31
HLA-A-206ENST00000479320 RABAC1Q9UI14 185 aa13.1□□□□□ -0.31
HLA-A-206ENST00000479320 U3KQE9 123 aa13.1□□□□□ -0.31
HLA-A-206ENST00000479320 PIGBOS1A0A0B4J2F0 54 aa13.09□□□□□ -0.31
HLA-A-206ENST00000479320 PITX3O75364 302 aa13.09□□□□□ -0.31
HLA-A-206ENST00000479320 EWSR1Q01844 656 aaKnown RBP eCLIP13.09□□□□□ -0.31
HLA-A-206ENST00000479320 LRTM2Q8N967 370 aa13.09□□□□□ -0.31
HLA-A-206ENST00000479320 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
HLA-A-206ENST00000479320 EIF5A2Q9GZV4 153 aaKnown RBP13.09□□□□□ -0.31
HLA-A-206ENST00000479320 DOK5Q9P104 306 aa13.09□□□□□ -0.31
HLA-A-206ENST00000479320 DNAH1Q9P2D7 4330 aa13.09□□□□□ -0.31
HLA-A-206ENST00000479320 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
HLA-A-206ENST00000479320 STXBP6Q8NFX7 210 aa13.08□□□□□ -0.32
HLA-A-206ENST00000479320 GRAMD2BQ96HH9 432 aa13.08□□□□□ -0.32
HLA-A-206ENST00000479320 K7EQG2 157 aa13.07□□□□□ -0.32
HLA-A-206ENST00000479320 IL4P05112 153 aa13.07□□□□□ -0.32
HLA-A-206ENST00000479320 FGF7P21781 194 aa13.07□□□□□ -0.32
HLA-A-206ENST00000479320 RPS10P46783 165 aaKnown RBP13.07□□□□□ -0.32
HLA-A-206ENST00000479320 ATP5IP56385 69 aaPredicted RBP13.07□□□□□ -0.32
HLA-A-206ENST00000479320 S100A10P60903 97 aa13.07□□□□□ -0.32
HLA-A-206ENST00000479320 USF2Q15853 346 aaPredicted RBP13.07□□□□□ -0.32
HLA-A-206ENST00000479320 IAH1Q2TAA2 248 aaPredicted RBP13.07□□□□□ -0.32
HLA-A-206ENST00000479320 HIST3H2BBQ8N257 126 aa13.07□□□□□ -0.32
HLA-A-206ENST00000479320 AGRNO00468 2067 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 HYDINQ4G0P3 5121 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 IFITM10A6NMD0 228 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 AGPAT2O15120 278 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 TOMM40O96008 361 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 HBE1P02100 147 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 SLC25A6P12236 298 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 PNRC1Q12796 327 aaPredicted RBP13.06□□□□□ -0.32
HLA-A-206ENST00000479320 C16orf54Q6UWD8 224 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 DCANP1Q8TF63 244 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 ISOC2Q96AB3 205 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 NEU1Q99519 415 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 PLA2G2EQ9NZK7 142 aa13.06□□□□□ -0.32
HLA-A-206ENST00000479320 PLECQ15149 4684 aaKnown RBP13.05□□□□□ -0.32
HLA-A-206ENST00000479320 PSG1P11464 419 aa13.05□□□□□ -0.32
HLA-A-206ENST00000479320 NDUFA6P56556 154 aa13.05□□□□□ -0.32
HLA-A-206ENST00000479320 DLK1P80370 383 aa13.05□□□□□ -0.32
HLA-A-206ENST00000479320 GAMTQ14353 236 aa13.05□□□□□ -0.32
HLA-A-206ENST00000479320 GLMPQ8WWB7 406 aa13.05□□□□□ -0.32
HLA-A-206ENST00000479320 TVP23CQ96ET8 276 aa13.05□□□□□ -0.32
HLA-A-206ENST00000479320 HELTA6NFD8 242 aa13.04□□□□□ -0.32
HLA-A-206ENST00000479320 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
HLA-A-206ENST00000479320 MBPP02686 304 aaPredicted RBP13.04□□□□□ -0.32
HLA-A-206ENST00000479320 IAPPP10997 89 aa13.04□□□□□ -0.32
HLA-A-206ENST00000479320 ZNF266Q14584 549 aa13.04□□□□□ -0.32
HLA-A-206ENST00000479320 OR10D4PQ8NGN7 298 aa13.04□□□□□ -0.32
HLA-A-206ENST00000479320 GATAD1Q8WUU5 269 aa13.04□□□□□ -0.32
HLA-A-206ENST00000479320 RARRES2Q99969 163 aa13.04□□□□□ -0.32
HLA-A-206ENST00000479320 ACTR3CQ9C0K3 210 aaPredicted RBP13.04□□□□□ -0.32
HLA-A-206ENST00000479320 IGKV1D-37A0A075B6S9 117 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 SMCO3A2RU48 225 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 RBFOX3A6NFN3 312 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 BUB3O43684 328 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 CA1P00915 261 aaPredicted RBP13.03□□□□□ -0.32
HLA-A-206ENST00000479320 ZNF688P0C7X2 276 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 NHLH2Q02577 135 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 PMS2P11Q13670 270 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 ZNF674Q2M3X9 581 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 COA6Q5JTJ3 125 aaKnown RBP13.03□□□□□ -0.32
HLA-A-206ENST00000479320 ZNF506Q5JVG8 444 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 STHQ8IWL8 128 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 OR51G1Q8NGK1 321 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 NDUFAF3Q9BU61 184 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 CTDSP1Q9GZU7 261 aa13.03□□□□□ -0.32
HLA-A-206ENST00000479320 TRAV1-1A0A0B4J248 108 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 A0A1B0GV90 55 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST1H2BKO60814 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 GCGP01275 180 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST1H2BJP06899 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST1H2BOP23527 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST1H2BBP33778 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 AKR1C3P42330 323 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST1H2BDP58876 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 RAB11AP62491 216 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST1H2BCP62807 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 JOSD1Q15040 202 aaPredicted RBP13.02□□□□□ -0.33
HLA-A-206ENST00000479320 ELOBQ15370 118 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST2H2BEQ16778 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 KHDC3LQ587J8 217 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.02□□□□□ -0.33
HLA-A-206ENST00000479320 GGNBP1Q5YKI7 109 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST1H2BHQ93079 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.33
HLA-A-206ENST00000479320 RNF125Q96EQ8 232 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 SLC35E1Q96K37 410 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST1H2BNQ99877 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 HIST1H2BMQ99879 126 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 MAGT1Q9H0U3 335 aa13.02□□□□□ -0.33
HLA-A-206ENST00000479320 GSKIPQ9P0R6 139 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms