RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197		H3BQ15	152 aa		13.28	□□□□□ -0.28
RFK-204	ENST00000479197	APOC4	P55056	127 aa		13.28	□□□□□ -0.28
RFK-204	ENST00000479197	RAB2A	P61019	212 aa		13.28	□□□□□ -0.28
RFK-204	ENST00000479197	GUK1	Q16774	197 aa		13.28	□□□□□ -0.28
RFK-204	ENST00000479197	FAM167A-AS1	Q96KT0	104 aa		13.28	□□□□□ -0.28
RFK-204	ENST00000479197	C20orf173	Q96LM9	149 aa		13.28	□□□□□ -0.28
RFK-204	ENST00000479197	SLC50A1	Q9BRV3	221 aa		13.28	□□□□□ -0.28
RFK-204	ENST00000479197	BCL2L11	O43521	198 aa		13.27	□□□□□ -0.29
RFK-204	ENST00000479197	PYY	P10082	97 aa		13.27	□□□□□ -0.29
RFK-204	ENST00000479197	IGFL4	Q6B9Z1	124 aa		13.27	□□□□□ -0.29
RFK-204	ENST00000479197	RNF182	Q8N6D2	247 aa		13.27	□□□□□ -0.29
RFK-204	ENST00000479197	OR10G4	Q8NGN3	311 aa		13.27	□□□□□ -0.29
RFK-204	ENST00000479197	OR10G9	Q8NGN4	311 aa		13.27	□□□□□ -0.29
RFK-204	ENST00000479197	OR10G7	Q8NGN6	311 aa		13.27	□□□□□ -0.29
RFK-204	ENST00000479197	TM2D3	Q9BRN9	247 aa		13.27	□□□□□ -0.29
RFK-204	ENST00000479197	RPRM	Q9NS64	109 aa		13.27	□□□□□ -0.29
RFK-204	ENST00000479197	KIR2DL5B	A0A0G2JN68	375 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	KIR2DL5B	A0A0G2JPC4	375 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197		A0A1W2PPV4	95 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197		H3BTX0	84 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	MB	P02144	154 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	TAS2R45	P59539	299 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	KHDC3L	Q587J8	217 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	FOXI2	Q6ZQN5	318 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	TRPT1	Q86TN4	253 aa	Known RBP	13.26	□□□□□ -0.29
RFK-204	ENST00000479197	KIR2DL5A	Q8N109	375 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	KIR2DL5B	Q8NHK3	375 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	HYLS1	Q96M11	299 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.26	□□□□□ -0.29
RFK-204	ENST00000479197	ZNF586	Q9NXT0	402 aa		13.26	□□□□□ -0.29
RFK-204	ENST00000479197	SLC17A3	O00476	420 aa		13.25	□□□□□ -0.29
RFK-204	ENST00000479197	PFDN1	O60925	122 aa		13.25	□□□□□ -0.29
RFK-204	ENST00000479197	HIST1H1E	P10412	219 aa	Known RBP	13.25	□□□□□ -0.29
RFK-204	ENST00000479197	DEFB1	P60022	68 aa		13.25	□□□□□ -0.29
RFK-204	ENST00000479197	CD300C	Q08708	224 aa		13.25	□□□□□ -0.29
RFK-204	ENST00000479197	FAM122C	Q6P4D5	195 aa		13.25	□□□□□ -0.29
RFK-204	ENST00000479197	TMUB2	Q71RG4	321 aa		13.25	□□□□□ -0.29
RFK-204	ENST00000479197	SAT2	Q96F10	170 aa	Predicted RBP	13.25	□□□□□ -0.29
RFK-204	ENST00000479197	PAXX	Q9BUH6	204 aa		13.25	□□□□□ -0.29
RFK-204	ENST00000479197	OR51M1	Q9H341	326 aa		13.25	□□□□□ -0.29
RFK-204	ENST00000479197	SAV1	Q9H4B6	383 aa	Predicted RBP	13.25	□□□□□ -0.29
RFK-204	ENST00000479197	ZMAT4	Q9H898	229 aa		13.25	□□□□□ -0.29
RFK-204	ENST00000479197	TRBV19	A0A075B6N1	114 aa		13.24	□□□□□ -0.29
RFK-204	ENST00000479197	OR7C2	O60412	319 aa		13.24	□□□□□ -0.29
RFK-204	ENST00000479197	ZNF253	O75346	499 aa		13.24	□□□□□ -0.29
RFK-204	ENST00000479197	HLA-DRB4	P13762	266 aa		13.24	□□□□□ -0.29
RFK-204	ENST00000479197	HLA-DMB	P28068	263 aa		13.24	□□□□□ -0.29
RFK-204	ENST00000479197	GDF5OS	Q5U4N7	250 aa		13.24	□□□□□ -0.29
RFK-204	ENST00000479197	ZNF738	Q8NE65	137 aa		13.24	□□□□□ -0.29
RFK-204	ENST00000479197	SPATA25	Q9BR10	227 aa		13.24	□□□□□ -0.29
RFK-204	ENST00000479197	ZNF471	Q9BX82	626 aa	Predicted RBP	13.24	□□□□□ -0.29
RFK-204	ENST00000479197	HLA-DRB4	X5D2U9	266 aa		13.24	□□□□□ -0.29
RFK-204	ENST00000479197		H3BMM0	161 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	CDC34	P49427	236 aa	Predicted RBP	13.23	□□□□□ -0.29
RFK-204	ENST00000479197	PDE6H	Q13956	83 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	PSG3	Q16557	428 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	TMEM41B	Q5BJD5	291 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	EBLN2	Q6P2I7	272 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	RPP25L	Q8N5L8	163 aa	Known RBP	13.23	□□□□□ -0.29
RFK-204	ENST00000479197	FXYD5	Q96DB9	178 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	CSTL1	Q9H114	145 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197		F6UB75	175 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	UBE2C	O00762	179 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	EIF3G	O75821	320 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
RFK-204	ENST00000479197	OR10J4	P0C629	311 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	SPP1	P10451	314 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.23	□□□□□ -0.29
RFK-204	ENST00000479197	BLNK	Q8WV28	456 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	RNF141	Q8WVD5	230 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	ZNF503	Q96F45	646 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	CLEC5A	Q9NY25	188 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197	NBEAL2	Q6ZNJ1	2754 aa		13.23	□□□□□ -0.29
RFK-204	ENST00000479197		A0A0J9YX75	114 aa		13.22	□□□□□ -0.29
RFK-204	ENST00000479197	NBEAP1	P0C6P0	100 aa		13.22	□□□□□ -0.29
RFK-204	ENST00000479197	UBE2L3	P68036	154 aa	Known RBP	13.22	□□□□□ -0.29
RFK-204	ENST00000479197	ZFP69	Q49AA0	526 aa		13.22	□□□□□ -0.29
RFK-204	ENST00000479197	NDUFB4	O95168	129 aa		13.21	□□□□□ -0.29
RFK-204	ENST00000479197	EIF5A	P63241	154 aa	Known RBP	13.21	□□□□□ -0.29
RFK-204	ENST00000479197	PSG9	Q00887	426 aa		13.21	□□□□□ -0.29
RFK-204	ENST00000479197	AKR1C8P	Q5T2L2	129 aa		13.21	□□□□□ -0.29
RFK-204	ENST00000479197	MORN3	Q6PF18	240 aa	Predicted RBP	13.21	□□□□□ -0.29
RFK-204	ENST00000479197	PQLC2	Q6ZP29	291 aa		13.21	□□□□□ -0.29
RFK-204	ENST00000479197		Q6ZWC4	215 aa		13.21	□□□□□ -0.29
RFK-204	ENST00000479197	RAB24	Q969Q5	203 aa		13.21	□□□□□ -0.29
RFK-204	ENST00000479197	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.21	□□□□□ -0.29
RFK-204	ENST00000479197	RETN	Q9HD89	108 aa		13.21	□□□□□ -0.29
RFK-204	ENST00000479197	HMGB3	O15347	200 aa	Known RBP	13.2	□□□□□ -0.3
RFK-204	ENST00000479197	CA1	P00915	261 aa	Predicted RBP	13.2	□□□□□ -0.3
RFK-204	ENST00000479197	RPUSD4	Q96CM3	377 aa	Known RBP	13.2	□□□□□ -0.3
RFK-204	ENST00000479197	RCHY1	Q96PM5	261 aa		13.2	□□□□□ -0.3
RFK-204	ENST00000479197		U3KQK5	164 aa		13.2	□□□□□ -0.3
RFK-204	ENST00000479197	IGKV3-20	P01619	116 aa		13.19	□□□□□ -0.3
RFK-204	ENST00000479197	STAG3L2	P0CL84	134 aa		13.19	□□□□□ -0.3
RFK-204	ENST00000479197	STAG3L3	P0CL85	134 aa		13.19	□□□□□ -0.3
RFK-204	ENST00000479197	TPT1	P13693	172 aa	Known RBP	13.19	□□□□□ -0.3
RFK-204	ENST00000479197	NUTF2	P61970	127 aa	Known RBP	13.19	□□□□□ -0.3
RFK-204	ENST00000479197	DEFB135	Q30KP9	77 aa		13.19	□□□□□ -0.3
RFK-204	ENST00000479197	BAP18	Q8IXM2	172 aa		13.19	□□□□□ -0.3
RFK-204	ENST00000479197	OR4B1	Q8NGF8	309 aa		13.19	□□□□□ -0.3
RFK-204	ENST00000479197	CLUHP3	Q96NS8	147 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms