RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 A8MWP6 167 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 LINC01619G3V211 115 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 ZNF207O43670 478 aaKnown RBP5.06□□□□□ -1.6
USP48-208ENST00000479177 CXorf1O96002 111 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 ZP3P21754 424 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 CRYBB3P26998 211 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 GCHFRP30047 84 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 CCL20P78556 96 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 RPEL1Q2QD12 228 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 AWAT1Q58HT5 328 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 LEMD1Q68G75 181 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 PQLC2Q6ZP29 291 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 S100A7AQ86SG5 101 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 COMMD7Q86VX2 200 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 OR1N2Q8NGR9 330 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 DUX3Q96PT4 197 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 METTL26Q96S19 204 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 C20orf24Q9BUV8 137 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 TNFRSF18Q9Y5U5 241 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 ANK2Q01484 3957 aa5.06□□□□□ -1.6
USP48-208ENST00000479177 TMEM213A2RRL7 107 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 K7EMT4 169 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 LGALS9O00182 355 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 MRPS12O15235 138 aaKnown RBP5.05□□□□□ -1.6
USP48-208ENST00000479177 OR7C2O60412 319 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 APOHP02749 345 aaPredicted RBP5.05□□□□□ -1.6
USP48-208ENST00000479177 PYYP10082 97 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 S100A7P31151 101 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 SYNJ2BPP57105 145 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 UBE2L3P68036 154 aaKnown RBP5.05□□□□□ -1.6
USP48-208ENST00000479177 PMS2P11Q13670 270 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 KLF5Q13887 457 aaPredicted RBP5.05□□□□□ -1.6
USP48-208ENST00000479177 NDUFA5Q16718 116 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 FAM106AQ4KMX7 169 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 NDUFA11Q86Y39 141 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 IQCF2Q8IXL9 164 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 STXBP6Q8NFX7 210 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 OR11H1Q8NG94 326 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 SUN5Q8TC36 379 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 FXYD5Q96DB9 178 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 PAXXQ9BUH6 204 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 DAZ1Q9NQZ3 744 aaKnown RBP5.05□□□□□ -1.6
USP48-208ENST00000479177 TMEM14CQ9P0S9 112 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 UFC1Q9Y3C8 167 aa5.05□□□□□ -1.6
USP48-208ENST00000479177 IGHV3OR16-13A0A075B7E8 117 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 IGHV3-49A0A0A0MS15 119 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 IGHV3-74A0A0B4J1X5 117 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 IGHV7-4-1A0A0J9YVY3 117 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 LOC102723971A0A1B0GUV8 181 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 ZNF320A2RRD8 509 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 RAB19A4D1S5 217 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 CCL24O00175 119 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 BUB3O43684 328 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 IFNA1P01562 189 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 OR10J4P0C629 311 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 IGLC2P0DOY2 106 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 BCL2P10415 239 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 RPL7P18124 248 aaKnown RBP5.04□□□□□ -1.6
USP48-208ENST00000479177 EDN2P20800 178 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 MALP21145 153 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 NPPCP23582 126 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 PSMB3P49720 205 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 PPT1P50897 306 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 NSUN5P1Q3KNT7 163 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 ZNF506Q5JVG8 444 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 C1orf194Q5T5A4 169 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 C16orf54Q6UWD8 224 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 BPIFA4PQ86YQ2 179 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 GLMPQ8WWB7 406 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 DPF1Q92782 380 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 MARC2Q969Z3 335 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 NARS2Q96I59 477 aaKnown RBP5.04□□□□□ -1.6
USP48-208ENST00000479177 FAM210AQ96ND0 272 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 CITED1Q99966 193 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 OR51M1Q9H341 326 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 MANBALQ9NQG1 85 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 TMEM167BQ9NRX6 74 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 GNG13Q9P2W3 67 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 RNF24Q9Y225 148 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 ARL2-SNX15V9GYD0 113 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 PKD1L1Q8TDX9 2849 aa5.04□□□□□ -1.6
USP48-208ENST00000479177 A0A087X0K7 114 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 IGHV3-66A0A0C4DH42 116 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 RBFOX3A6NFN3 312 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 C2orf70A6NJV1 201 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 H3BQ15 152 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 HIST1H1EP10412 219 aaKnown RBP5.03□□□□□ -1.6
USP48-208ENST00000479177 MYCNOSP40205 109 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 RIPPLY3P57055 190 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 GUK1Q16774 197 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 HAGHQ16775 308 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 SLC7A5P1Q8MH63 180 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 OR8I2Q8N0Y5 310 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 EIF4E3Q8N5X7 224 aaKnown RBP5.03□□□□□ -1.6
USP48-208ENST00000479177 OR4F17Q8NGA8 305 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 DLX4Q92988 240 aaPredicted RBP5.03□□□□□ -1.6
USP48-208ENST00000479177 C17orf77Q96MU5 243 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 GPR82Q96P67 336 aa5.03□□□□□ -1.6
USP48-208ENST00000479177 OR4F4Q96R69 305 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms