RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 BMI1P35226 326 aa11.26□□□□□ -0.61
CCDC78-210ENST00000478979 TMEM116Q8NCL8 245 aa11.26□□□□□ -0.61
CCDC78-210ENST00000478979 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
CCDC78-210ENST00000478979 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.25□□□□□ -0.61
CCDC78-210ENST00000478979 NDUFS8O00217 210 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 DLL1O00548 723 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 OR5AN1Q8NGI8 311 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 A0A1W2PPI3 338 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 A8MWL6 223 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 SHISA9B4DS77 424 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 C3orf36Q3SXR2 165 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 Q5PR19 223 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 NDFIP1Q9BT67 221 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 GTSF1LQ9H1H1 148 aa11.25□□□□□ -0.61
CCDC78-210ENST00000478979 VSTM2AQ8TAG5 236 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 NEU4Q8WWR8 484 aaPredicted RBP11.24□□□□□ -0.61
CCDC78-210ENST00000478979 PERPQ96FX8 193 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 CELSR1Q9NYQ6 3014 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 AZU1P20160 251 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
CCDC78-210ENST00000478979 MEF2CQ06413 473 aaPredicted RBP11.24□□□□□ -0.61
CCDC78-210ENST00000478979 TMEM177Q53S58 311 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 ZNF747Q9BV97 191 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 P01737 135 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 IGHV1-8P0DP01 117 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 C16orf54Q6UWD8 224 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 SOX21Q9Y651 276 aaPredicted RBP11.24□□□□□ -0.61
CCDC78-210ENST00000478979 S4R3C0 116 aa11.24□□□□□ -0.61
CCDC78-210ENST00000478979 A0A1W2PPM0 123 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 SLC25A5P05141 298 aaKnown RBP11.23□□□□□ -0.61
CCDC78-210ENST00000478979 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 PRSS57Q6UWY2 283 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 OR5A1Q8NGJ0 315 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 LINC00574Q9H8X3 128 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 VSTM5A8MXK1 200 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 SMIM17P0DL12 118 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 PATE2Q6UY27 113 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 RBPMS2Q6ZRY4 209 aaKnown RBP11.23□□□□□ -0.61
CCDC78-210ENST00000478979 LINC00305Q7Z4B0 112 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 FXYD5Q96DB9 178 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 GPR82Q96P67 336 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 PRSS22Q9GZN4 317 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 ZFHX3Q15911 3703 aa11.23□□□□□ -0.61
CCDC78-210ENST00000478979 PPIAL4CA0A0B4J2A2 164 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 TEX48A0A1B0GUV7 120 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 IGLV2-23P01705 113 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 PLGLAQ15195 96 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 AP5S1Q9NUS5 200 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 THYN1Q9P016 225 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 EPDR1Q9UM22 224 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.22□□□□□ -0.61
CCDC78-210ENST00000478979 APOHP02749 345 aaPredicted RBP11.22□□□□□ -0.61
CCDC78-210ENST00000478979 VMA21Q3ZAQ7 101 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 ASCL2Q99929 193 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 FBXL15Q9H469 300 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 TMEM238LA0A1B0GVL6 79 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 HSD52Q0P140 79 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 MLST8Q9BVC4 326 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 ONECUT1Q9UBC0 465 aa11.22□□□□□ -0.61
CCDC78-210ENST00000478979 BOD1L2Q8IYS8 172 aa11.21□□□□□ -0.61
CCDC78-210ENST00000478979 TMEM167AQ8TBQ9 72 aa11.21□□□□□ -0.61
CCDC78-210ENST00000478979 A1L4Q6 167 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 PGPA6NDG6 321 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 CD3EP07766 207 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 MYCNOSP40205 109 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 CDSNQ15517 529 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 CT83Q5H943 113 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 PDPNQ86YL7 162 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 OR8A1Q8NGG7 326 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 TMEM133Q9H2Q1 129 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 INSIG2Q9Y5U4 225 aa11.21□□□□□ -0.62
CCDC78-210ENST00000478979 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 C19orf71A6NCJ1 209 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 C22orf46C9J442 243 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 TMEM155Q4W5P6 130 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 DAZAP1Q96EP5 407 aaKnown RBP11.2□□□□□ -0.62
CCDC78-210ENST00000478979 SIGMAR1Q99720 223 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 SMAD7O15105 426 aaKnown RBP11.2□□□□□ -0.62
CCDC78-210ENST00000478979 FABP2P12104 132 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 SUB1P53999 127 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC78-210ENST00000478979 ADAMTSL5Q6ZMM2 481 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 NGBQ9NPG2 151 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
CCDC78-210ENST00000478979 HIVEP3Q5T1R4 2406 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 CSN1S1P47710 185 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 TM4SF20Q53R12 229 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 KLF12Q9Y4X4 402 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 TCRBV4S1A1TA0A5B7 111 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 RPL27AP46776 148 aaKnown RBP11.19□□□□□ -0.62
CCDC78-210ENST00000478979 FA2HQ7L5A8 372 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 OR1L4Q8NGR5 311 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 DPF1Q92782 380 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 GFRA4Q9GZZ7 299 aa11.19□□□□□ -0.62
CCDC78-210ENST00000478979 A0A1B0GV72 72 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 DLX6P56179 175 aa11.18□□□□□ -0.62
CCDC78-210ENST00000478979 FSTL3O95633 263 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms