RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 FXYD4P59646 89 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 RGS21Q2M5E4 152 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 Q86TA4 180 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 OR5AS1Q8N127 324 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 OR5D16Q8NGK9 328 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 OR10X1Q8NGY0 326 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 OR4K15Q8NH41 348 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 ZNF431Q8TF32 576 aaPredicted RBP0.04□□□□□ -2.4
SYCP3-205ENST00000478238 TSKUQ8WUA8 353 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 CHCHD1Q96BP2 118 aaKnown RBP0.04□□□□□ -2.4
SYCP3-205ENST00000478238 CCDC94Q9BW85 323 aaPredicted RBP0.04□□□□□ -2.4
SYCP3-205ENST00000478238 OPTCQ9UBM4 332 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 ARL5AQ9Y689 179 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 BCL9O00512 1426 aa0.04□□□□□ -2.4
SYCP3-205ENST00000478238 ANK1P16157 1881 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 ANKRD31Q8N7Z5 1873 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 A0A087WSZ3 146 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 C9orf170A2RU37 121 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 ZNF727A8MUV8 499 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 K7ERJ3 54 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 SERPINA1P01009 418 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 C1QBP02746 253 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 CST2P09228 141 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 CXCL1P09341 107 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 CTXN2P0C2S0 81 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 OR10J4P0C629 311 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 RAB5CP51148 216 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 INSL3P51460 131 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 TMBIM6P55061 237 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 ARPP19P56211 112 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 ERVS71-1P61550 626 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 NCALDP61601 193 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 HSPE1P61604 102 aaKnown RBP0.03□□□□□ -2.4
SYCP3-205ENST00000478238 EIF3IQ13347 325 aaKnown RBP0.03□□□□□ -2.4
SYCP3-205ENST00000478238 ARPINQ7Z6K5 226 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 ATOH7Q8N100 152 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 OR10AG1Q8NH19 301 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 TEX37Q96LM6 180 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 HYLS1Q96M11 299 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 ZNF714Q96N38 554 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 LIMD2Q9BT23 127 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 POPDC3Q9HBV1 291 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 ARL2BPQ9Y2Y0 163 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 RFX7Q2KHR2 1363 aa0.03□□□□□ -2.4
SYCP3-205ENST00000478238 PTPRZ1P23471 2315 aaPredicted RBP0.03□□□□□ -2.41
SYCP3-205ENST00000478238 ERBINQ96RT1 1412 aa0.03□□□□□ -2.41
SYCP3-205ENST00000478238 ANKRD17O75179 2603 aaKnown RBP0.02□□□□□ -2.41
SYCP3-205ENST00000478238 CAMSAP1Q5T5Y3 1602 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 TRPM1Q7Z4N2 1603 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 KIAA1549LQ6ZVL6 1849 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 TRAV27A0A087WT01 109 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 ODAMA1E959 279 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 RER1O15258 196 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 GNG5P63218 68 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 REEP5Q00765 189 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 KLRD1Q13241 179 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 MSMO1Q15800 293 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 AKIRIN2Q53H80 203 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 OCIAD2Q56VL3 154 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 Q6ZS92 163 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 IFT20Q8IY31 132 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 LRRC18Q8N456 261 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 PLAC4Q8WY50 150 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 PHB2Q99623 299 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 CACYBPQ9HB71 228 aaKnown RBP0.02□□□□□ -2.41
SYCP3-205ENST00000478238 ARMC1Q9NVT9 282 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 ASB4Q9Y574 426 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 BDP1A6H8Y1 2624 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 ADGRL3Q9HAR2 1447 aa0.02□□□□□ -2.41
SYCP3-205ENST00000478238 AFDNP55196 1824 aaKnown RBP0.01□□□□□ -2.41
SYCP3-205ENST00000478238 NUP210Q8TEM1 1887 aaPredicted RBP0.01□□□□□ -2.41
SYCP3-205ENST00000478238 A0A096LPI6 279 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 DUXBA0A1W2PPF3 345 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 hDV103S1A0JD37 113 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 TRGC2P03986 189 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 IFNA6P05013 189 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 CCL4P13236 92 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 IDO1P14902 403 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 MIR22HGQ0VDD5 57 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 SNCBQ16143 134 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 FOXI2Q6ZQN5 318 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 Q6ZQY7 126 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 PPTC7Q8NI37 304 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 GPX7Q96SL4 187 aaPredicted RBP0.01□□□□□ -2.41
SYCP3-205ENST00000478238 CCL19Q99731 98 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 PAIP2Q9BPZ3 127 aaKnown RBP0.01□□□□□ -2.41
SYCP3-205ENST00000478238 TCEAL2Q9H3H9 227 aaPredicted RBP0.01□□□□□ -2.41
SYCP3-205ENST00000478238 JPT1Q9UK76 154 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 PRNDQ9UKY0 176 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 RNF11Q9Y3C5 154 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 OTOGQ6ZRI0 2925 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 FRMPD1Q5SYB0 1578 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 PIK3C2AO00443 1686 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 CTTNBP2Q8WZ74 1663 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.01□□□□□ -2.41
SYCP3-205ENST00000478238 RBBP6Q7Z6E9 1792 aaKnown RBP0.01□□□□□ -2.41
SYCP3-205ENST00000478238 NINQ8N4C6 2090 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 KNTC1P50748 2209 aa0.01□□□□□ -2.41
SYCP3-205ENST00000478238 DMBT1Q9UGM3 2413 aaPredicted RBP0.01□□□□□ -2.41
SYCP3-205ENST00000478238 IGSF10Q6WRI0 2623 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms