RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TRDCB7Z8K6 153 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 J3QLW9 94 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 ZNF701M0R085 212 aaPredicted RBP2.71□□□□□ -1.98
VPS50-214ENST00000477935 GNGT2O14610 69 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 GNG7O60262 68 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 UBBP0CG47 229 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 TRAPPC2P0DI81 140 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 TRAPPC2BP0DI82 140 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 CD36P16671 472 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 IGFBP3P17936 291 aaPredicted RBP2.71□□□□□ -1.98
VPS50-214ENST00000477935 CALB2P22676 271 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 CRYBB3P26998 211 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 DCKP27707 260 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 ETV6P41212 452 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 RPS10P46783 165 aaKnown RBP2.71□□□□□ -1.98
VPS50-214ENST00000477935 MRPS15P82914 257 aaKnown RBP2.71□□□□□ -1.98
VPS50-214ENST00000477935 KCNIP4Q6PIL6 250 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 FOXI2Q6ZQN5 318 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 ZNF493Q6ZR52 646 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 C6orf201Q7Z4U5 140 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 TMED4Q7Z7H5 227 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 VKORC1L1Q8N0U8 176 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 SYS1Q8N2H4 156 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 JAGN1Q8N5M9 183 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 ACBD7Q8N6N7 88 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 CHCHD10Q8WYQ3 142 aaPredicted RBP2.71□□□□□ -1.98
VPS50-214ENST00000477935 CMTM5Q96DZ9 223 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 PGLYRP4Q96LB8 373 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 SAV1Q9H4B6 383 aaPredicted RBP2.71□□□□□ -1.98
VPS50-214ENST00000477935 IGKV1D-8A0A087WSZ0 117 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 A0A096LPF7 62 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 TRBV6-7A0A0A0MS04 114 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 IGHV3-21A0A0B4J1V1 117 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 IGKV1-6A0A0C4DH72 117 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 A0A0D9SG52 128 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 J3QRE1 110 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 MFNGO00587 321 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 ATP8B1O43520 1251 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 DENRO43583 198 aaKnown RBP2.7□□□□□ -1.98
VPS50-214ENST00000477935 EDF1O60869 148 aaKnown RBP2.7□□□□□ -1.98
VPS50-214ENST00000477935 CALRP27797 417 aaKnown RBP2.7□□□□□ -1.98
VPS50-214ENST00000477935 LEPP41159 167 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 GBX2P52951 348 aaPredicted RBP2.7□□□□□ -1.98
VPS50-214ENST00000477935 FXYD7P58549 80 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 WT1-ASQ06250 92 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 CCDC58Q4VC31 144 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 ACSM3Q53FZ2 586 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 OR2G6Q5TZ20 316 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 EBLN2Q6P2I7 272 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 OR8J1Q8NGP2 316 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 OR1P1Q8NH06 330 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 LSM10Q969L4 123 aaKnown RBP2.7□□□□□ -1.98
VPS50-214ENST00000477935 PPP1R14BQ96C90 147 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 HSD17B10Q99714 261 aaKnown RBP2.7□□□□□ -1.98
VPS50-214ENST00000477935 PDCD1LG2Q9BQ51 273 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 LINC00467Q9BRT7 94 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 HRASLSQ9HDD0 168 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 C12orf4Q9NQ89 552 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 FGFR1OP2Q9NVK5 253 aa2.7□□□□□ -1.98
VPS50-214ENST00000477935 PLAC8L1A1L4L8 177 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 SNTNA6NMZ2 147 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 ZNF705GA8MUZ8 300 aaPredicted RBP2.69□□□□□ -1.98
VPS50-214ENST00000477935 C9JCJ5 164 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 I3L2K1 104 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 UPK2O00526 184 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 BET1O15155 118 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 FABP7O15540 132 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 RBFOX2O43251 390 aaKnown RBP eCLIP2.69□□□□□ -1.98
VPS50-214ENST00000477935 INSP01308 110 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 CDK1P06493 297 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 CRYGDP07320 174 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 TAS2R31P59538 309 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 POU2AF1Q16633 256 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 SAMD13Q5VXD3 122 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 C12orf73Q69YU5 71 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 RPL22L1Q6P5R6 122 aaKnown RBP2.69□□□□□ -1.98
VPS50-214ENST00000477935 LYPD5Q6UWN5 251 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 ACOT7LQ6ZUV0 252 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 TMEM144Q7Z5S9 345 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 TMEM256Q8N2U0 113 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 MTURNQ8N3F0 131 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 OR10W1Q8NGF6 305 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 OR1L8Q8NGR8 309 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 NRBF2Q96F24 287 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 TMEM56Q96MV1 263 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 GINS4Q9BRT9 223 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 SLC35B3Q9H1N7 401 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 DCSTAMPQ9H295 470 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 NDUFA4L2Q9NRX3 87 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 CLEC2DQ9UHP7 191 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 AK3Q9UIJ7 227 aa2.69□□□□□ -1.98
VPS50-214ENST00000477935 A0A0J9YXV3 536 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 TEX50A0A1B0GTY4 177 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 ZNF98A6NK75 572 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 IBA57-AS1B1ANH7 110 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 J3QRK9 145 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 SNAI2O43623 268 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms