RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 PGLYRP1O75594 196 aaPredicted RBP4□□□□□ -1.77
LINC00173-202ENST00000477702 IGLV2-11P01706 119 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 RLN2P04090 185 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 CRYGDP07320 174 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 IGLC1P0CG04 106 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 RNASE2P10153 161 aaKnown RBP4□□□□□ -1.77
LINC00173-202ENST00000477702 OR10J1P30954 320 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 CBX5P45973 191 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 RND2P52198 227 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 HERV-K104P61576 105 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 HSPE1P61604 102 aaKnown RBP4□□□□□ -1.77
LINC00173-202ENST00000477702 C22orf42Q6IC83 251 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 LYPD5Q6UWN5 251 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 GPR141Q7Z602 305 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 LINC00612Q8N6U2 182 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 BEST4Q8NFU0 473 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 OR51G1Q8NGK1 321 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 OR6F1Q8NGZ6 308 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 RNASE8Q8TDE3 154 aaKnown RBP4□□□□□ -1.77
LINC00173-202ENST00000477702 TSC22D3Q99576 134 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 PBDC1Q9BVG4 233 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 Q9H521 79 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 Q9HAA7 133 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 IFT46Q9NQC8 304 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 RPRMQ9NS64 109 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 NDUFB11Q9NX14 153 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 DAPK2Q9UIK4 370 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 LPAP08519 4548 aa4□□□□□ -1.77
LINC00173-202ENST00000477702 TRAV18A0A075B6X5 111 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 TRAV30A0A087WSZ9 112 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 A0A0A6YYH2 397 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 A6NJ64 397 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 ZNF98A6NK75 572 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 ISLRO14498 428 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 GSTZ1O43708 216 aaPredicted RBP3.99□□□□□ -1.77
LINC00173-202ENST00000477702 RD3LP0DJH9 198 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 AQP4P55087 323 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 OR10A3P58181 314 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 LINC01547P58512 204 aaPredicted RBP3.99□□□□□ -1.77
LINC00173-202ENST00000477702 LPCAT3Q6P1A2 487 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 SFXN4Q6P4A7 337 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 Q6ZTI0 123 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 H2BFWTQ7Z2G1 175 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 SLC35G3Q8N808 338 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 OR1S2Q8NGQ3 325 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 TMEM263Q8WUH6 116 aaKnown RBP3.99□□□□□ -1.77
LINC00173-202ENST00000477702 S100A16Q96FQ6 103 aaKnown RBP3.99□□□□□ -1.77
LINC00173-202ENST00000477702 CNBD2Q96M20 576 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 RRP15Q9Y3B9 282 aaKnown RBP3.99□□□□□ -1.77
LINC00173-202ENST00000477702 ICOSQ9Y6W8 199 aa3.99□□□□□ -1.77
LINC00173-202ENST00000477702 TRGV2A0A075B6R0 118 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 SMIM31A0A1B0GVY4 71 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 BOLA2-SMG1P6H3BVE0 249 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 CCNKO75909 580 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 DUSP14O95147 198 aaKnown RBP3.98□□□□□ -1.77
LINC00173-202ENST00000477702 PSMB9P28065 219 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 ETV6P41212 452 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 SUB1P53999 127 aaKnown RBP eCLIP3.98□□□□□ -1.77
LINC00173-202ENST00000477702 YPEL3P61236 119 aaPredicted RBP3.98□□□□□ -1.77
LINC00173-202ENST00000477702 RHOBP62745 196 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 PNRC1Q12796 327 aaPredicted RBP3.98□□□□□ -1.77
LINC00173-202ENST00000477702 GAGE2BQ13066 116 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 GAMTQ14353 236 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 GAGE2EQ4V326 116 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 PRSS54Q6PEW0 395 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 ZNF493Q6ZR52 646 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 CROCCP3Q8IVE0 287 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 TMEM256Q8N2U0 113 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 RNF182Q8N6D2 247 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 LRTM2Q8N967 370 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 ZBTB8BQ8NAP8 495 aaPredicted RBP3.98□□□□□ -1.77
LINC00173-202ENST00000477702 OR5AP2Q8NGF4 316 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 MRGPRFQ96AM1 343 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 SEC22AQ96IW7 307 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 ST6GAL2Q96JF0 529 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 RHBDL2Q9NX52 303 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 GAGE2DQ9UEU5 116 aa3.98□□□□□ -1.77
LINC00173-202ENST00000477702 RCL1Q9Y2P8 373 aaKnown RBP3.98□□□□□ -1.77
LINC00173-202ENST00000477702 IGLV5-45A0A087WSX0 123 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 SNURFLB1AK76 121 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 CORTO00230 105 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 ATG12O94817 140 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 IGKV1-39P01597 117 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 IGHV3-53P01767 116 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 IGKV1D-39P04432 117 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 VPREB1P12018 145 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 RPL5P46777 297 aaKnown RBP3.97□□□□□ -1.77
LINC00173-202ENST00000477702 TAS2R46P59540 309 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 GABARAPL2P60520 117 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 TSPAN5P62079 268 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 HIST1H1AQ02539 215 aaPredicted RBP3.97□□□□□ -1.77
LINC00173-202ENST00000477702 ACOT6Q3I5F7 207 aaPredicted RBP3.97□□□□□ -1.77
LINC00173-202ENST00000477702 PHLDA2Q53GA4 152 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 IDNKQ5T6J7 187 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 HOGA1Q86XE5 327 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 OR8I2Q8N0Y5 310 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 OR5H2Q8NGV7 314 aa3.97□□□□□ -1.77
LINC00173-202ENST00000477702 RBPMSQ93062 196 aaKnown RBP3.97□□□□□ -1.77
LINC00173-202ENST00000477702 ACY3Q96HD9 319 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms