RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CRIP1P50238 77 aa9.22□□□□□ -0.93
PRPF39-203ENST00000477626 EXOC3-AS1Q8N2X6 119 aa9.22□□□□□ -0.93
PRPF39-203ENST00000477626 C5orf17Q8NAS9 161 aa9.22□□□□□ -0.93
PRPF39-203ENST00000477626 SMIM27A0A1W2PRY6 76 aa9.22□□□□□ -0.93
PRPF39-203ENST00000477626 CREBBPQ92793 2442 aa9.22□□□□□ -0.93
PRPF39-203ENST00000477626 TRGV3P03979 118 aa9.22□□□□□ -0.93
PRPF39-203ENST00000477626 FAM209BQ5JX69 171 aa9.22□□□□□ -0.93
PRPF39-203ENST00000477626 Q86TA4 180 aa9.22□□□□□ -0.93
PRPF39-203ENST00000477626 TRRAPQ9Y4A5 3859 aa9.21□□□□□ -0.93
PRPF39-203ENST00000477626 REC114Q7Z4M0 266 aa9.21□□□□□ -0.93
PRPF39-203ENST00000477626 SETXQ7Z333 2677 aaKnown RBP9.21□□□□□ -0.93
PRPF39-203ENST00000477626 K7EMT4 169 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 BPIFA4PQ86YQ2 179 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 FAM24BQ8N5W8 94 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 FMC1Q96HJ9 113 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 MLXQ9UH92 298 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 RABAC1Q9UI14 185 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 HELTA6NFD8 242 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 M0R036 132 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 RNASE1P07998 156 aaKnown RBP9.21□□□□□ -0.94
PRPF39-203ENST00000477626 Q6ZSV7 163 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 OSTCQ9NRP0 149 aa9.21□□□□□ -0.94
PRPF39-203ENST00000477626 SRP14P37108 136 aaKnown RBP9.2□□□□□ -0.94
PRPF39-203ENST00000477626 ZNF492Q9P255 531 aa9.2□□□□□ -0.94
PRPF39-203ENST00000477626 LGALS9O00182 355 aa9.2□□□□□ -0.94
PRPF39-203ENST00000477626 ELANEP08246 267 aa9.2□□□□□ -0.94
PRPF39-203ENST00000477626 TPPP2P59282 170 aa9.2□□□□□ -0.94
PRPF39-203ENST00000477626 RELQ04864 619 aaPredicted RBP9.2□□□□□ -0.94
PRPF39-203ENST00000477626 OR4X2Q8NGF9 303 aa9.2□□□□□ -0.94
PRPF39-203ENST00000477626 GPR82Q96P67 336 aa9.2□□□□□ -0.94
PRPF39-203ENST00000477626 RPLP1P05386 114 aaKnown RBP9.19□□□□□ -0.94
PRPF39-203ENST00000477626 RANP62826 216 aaKnown RBP9.19□□□□□ -0.94
PRPF39-203ENST00000477626 FHL3Q13643 280 aa9.19□□□□□ -0.94
PRPF39-203ENST00000477626 ZNF674Q2M3X9 581 aa9.19□□□□□ -0.94
PRPF39-203ENST00000477626 UBE2E2Q96LR5 201 aa9.19□□□□□ -0.94
PRPF39-203ENST00000477626 OR5I1Q13606 314 aa9.19□□□□□ -0.94
PRPF39-203ENST00000477626 MRPL53Q96EL3 112 aaKnown RBP9.19□□□□□ -0.94
PRPF39-203ENST00000477626 C20orf173Q96LM9 149 aa9.19□□□□□ -0.94
PRPF39-203ENST00000477626 H3BTX0 84 aa9.19□□□□□ -0.94
PRPF39-203ENST00000477626 APRG1Q8IVJ8 170 aa9.19□□□□□ -0.94
PRPF39-203ENST00000477626 TMEM183AQ8IXX5 376 aa9.19□□□□□ -0.94
PRPF39-203ENST00000477626 ACANP16112 2415 aa9.19□□□□□ -0.94
PRPF39-203ENST00000477626 TMEM213A2RRL7 107 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 RBAKDNA6NC62 111 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 PGPA6NDG6 321 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 ADARB2-AS1A8MUL3 147 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 LY6G6DO95868 133 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 ARL3P36405 182 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 ADIRFQ15847 76 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 C18orf65Q6ZTR6 163 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 WFDC12Q8WWY7 111 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 AURKAIP1Q9NWT8 199 aaPredicted RBP9.18□□□□□ -0.94
PRPF39-203ENST00000477626 RNF24Q9Y225 148 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 S100A9P06702 114 aaKnown RBP9.18□□□□□ -0.94
PRPF39-203ENST00000477626 PSG3Q16557 428 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 TRAV34A0A0B4J273 112 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 SNRPCP09234 159 aaKnown RBP9.18□□□□□ -0.94
PRPF39-203ENST00000477626 LGALS1P09382 135 aaKnown RBP9.18□□□□□ -0.94
PRPF39-203ENST00000477626 FRMD6-AS1P0C7T7 363 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 CEBPGP53567 150 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 FOXA3P55318 350 aaPredicted RBP9.18□□□□□ -0.94
PRPF39-203ENST00000477626 KLF5Q13887 457 aaPredicted RBP9.18□□□□□ -0.94
PRPF39-203ENST00000477626 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 DCANP1Q8TF63 244 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 BLNKQ8WV28 456 aa9.18□□□□□ -0.94
PRPF39-203ENST00000477626 TRAV9-1A0A075B6T8 112 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 HLA-DMBP28068 263 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 TEX29Q8N6K0 151 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 GATD1Q8NB37 220 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 RPL7P18124 248 aaKnown RBP9.17□□□□□ -0.94
PRPF39-203ENST00000477626 HILS1P60008 231 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 YAE1D1Q9NRH1 226 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 IL36BQ9NZH7 164 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 PEF1Q9UBV8 284 aaKnown RBP9.17□□□□□ -0.94
PRPF39-203ENST00000477626 C5orf52A6NGY3 159 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 IFITM10A6NMD0 228 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 CHEK1O14757 476 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 CT83Q5H943 113 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 ZC2HC1AQ96GY0 325 aa9.17□□□□□ -0.94
PRPF39-203ENST00000477626 RNASE7Q9H1E1 156 aaKnown RBP9.17□□□□□ -0.94
PRPF39-203ENST00000477626 TENM1Q9UKZ4 2725 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 PRAC2D3DTV9 90 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 GNG4P50150 75 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 NPFFR1Q9GZQ6 430 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 TRAV8-1A0A0A6YYK1 113 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 IGHV7-4-1A0A0J9YVY3 117 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 M0R3E3 92 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 IQCF2Q8IXL9 164 aa9.16□□□□□ -0.94
PRPF39-203ENST00000477626 FLNBO75369 2602 aaKnown RBP9.16□□□□□ -0.94
PRPF39-203ENST00000477626 PPP1R2P9O14990 202 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 GTSF1Q8WW33 167 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 SRD5A3Q9H8P0 318 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 PRELID1Q9Y255 219 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 IGHV3OR16-8A0A075B7F1 116 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 SERTM2A0A1B0GWG4 89 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 KRTAP10-3P60369 221 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 PSG9Q00887 426 aa9.15□□□□□ -0.94
PRPF39-203ENST00000477626 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms