RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	ZNF737	O75373	536 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	MPC2	O95563	127 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	C1QA	P02745	245 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	SRP19	P09132	144 aa	Known RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	PAEP	P09466	180 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	CASP1	P29466	404 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	BRS3	P32247	399 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	RNASE4	P34096	147 aa	Known RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	RPL22	P35268	128 aa	Known RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	GNG4	P50150	75 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	FOXA3	P55318	350 aa	Predicted RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	FXYD7	P58549	80 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	COPZ1	P61923	177 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	BTG2	P78543	158 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	TMEM155	Q4W5P6	130 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	COL5A1-AS1	Q5SY13	56 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	BCL2L15	Q5TBC7	163 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	ZNF705A	Q6ZN79	300 aa	Predicted RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	PHF5A	Q7RTV0	110 aa	Known RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	TRAPPC6B	Q86SZ2	158 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	CROCCP2	Q86T23	111 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	RPS19BP1	Q86WX3	136 aa	Known RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	CTAGE3P	Q8IX95	158 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	MMGT1	Q8N4V1	131 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	OR5A2	Q8NGI9	324 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	STAG3L4	Q8TBR4	150 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	RAB2B	Q8WUD1	216 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	MAGOHB	Q96A72	148 aa	Known RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	MRPL57	Q9BQC6	102 aa	Known RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	SNRNP25	Q9BV90	132 aa	Known RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	TMEM191A	Q9H0A3	160 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	EFCAB1	Q9HAE3	211 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	NAT8	Q9UHE5	227 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	BAIAP2	Q9UQB8	552 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	IER3IP1	Q9Y5U9	82 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	KIAA1107	Q9UPP5	1409 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	TRAPPC8	Q9Y2L5	1435 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	CHD2	O14647	1828 aa	Known RBP	0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	TAF1L	Q8IZX4	1826 aa		0.94	□□□□□ -2.26
TARDBP-208	ENST00000477447	CAMSAP2	Q08AD1	1489 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	DSPP	Q9NZW4	1301 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	PRDM2	Q13029	1718 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	SYNJ1	O43426	1573 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	KDM6A	O15550	1401 aa	Predicted RBP	0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	TRAV9-1	A0A075B6T8	112 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	TRAV27	A0A087WT01	109 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	IGHV1-58	A0A0C4DH39	117 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	IRGM	A1A4Y4	181 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	ODAM	A1E959	279 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	C19orf84	I3L1E1	186 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	TMEM256-PLSCR3	K7ERE1	68 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	CDC42EP2	O14613	210 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	OR2T1	O43869	369 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	PITX3	O75364	302 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	LYZL6	O75951	148 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	TNF	P01375	233 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	CXCL1	P09341	107 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	AKAIN1	P0CW23	69 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST1H2BO	P23527	126 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	NFYB	P25208	207 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST1H2BB	P33778	126 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	SDC2	P34741	201 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	AQP4	P55087	323 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST1H2BD	P58876	126 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST1H2BC	P62807	126 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	CCL20	P78556	96 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	PLGLB1	Q02325	96 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HSD52	Q0P140	79 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	MSMO1	Q15800	293 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	MIA	Q16674	131 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST2H2BE	Q16778	126 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	LINC01554	Q52M75	96 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	PYY3	Q5JQD4	70 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	MEIG1	Q5JSS6	88 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	LYRM7	Q5U5X0	104 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	LCN15	Q6UWW0	184 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	GKN2	Q86XP6	184 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	LINC00311	Q8N616	119 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	C5orf17	Q8NAS9	161 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	OR5D14	Q8NGL3	314 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	OR2T10	Q8NGZ9	312 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	OR10AC1	Q8NH08	325 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	PPTC7	Q8NI37	304 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST1H2BH	Q93079	126 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	DPH3	Q96FX2	82 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	IMMP2L	Q96T52	175 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST1H2BN	Q99877	126 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	HIST1H2BM	Q99879	126 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	ADAT1	Q9BUB4	502 aa	Known RBP	0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	DERL1	Q9BUN8	251 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	RPRM	Q9NS64	109 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	SCP2D1	Q9UJQ7	156 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	TIMM9	Q9Y5J7	89 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	MPC1	Q9Y5U8	109 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	SOX21	Q9Y651	276 aa	Predicted RBP	0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	SLX4	Q8IY92	1834 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	ERICH3	Q5RHP9	1530 aa		0.93	□□□□□ -2.26
TARDBP-208	ENST00000477447	ANKRD36B	Q8N2N9	1353 aa		0.93	□□□□□ -2.26

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