RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 SMIM3Q9BZL3 60 aa3.4□□□□□ -1.87
NSMCE4A-208ENST00000477289 ARL6Q9H0F7 186 aa3.4□□□□□ -1.87
NSMCE4A-208ENST00000477289 TUBA4BQ9H853 241 aa3.4□□□□□ -1.87
NSMCE4A-208ENST00000477289 SLC25A22Q9H936 323 aa3.4□□□□□ -1.87
NSMCE4A-208ENST00000477289 SMPXQ9UHP9 88 aa3.4□□□□□ -1.87
NSMCE4A-208ENST00000477289 WDR83OSQ9Y284 106 aa3.4□□□□□ -1.87
NSMCE4A-208ENST00000477289 ZFHX3Q15911 3703 aa3.4□□□□□ -1.87
NSMCE4A-208ENST00000477289 FBN1P35555 2871 aaKnown RBP3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 IGKV3-7A0A075B6H7 116 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 IGHV3OR16-13A0A075B7E8 117 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 IGHV3OR16-8A0A075B7F1 116 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 IGHV3-49A0A0A0MS15 119 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 IGHV3-74A0A0B4J1X5 117 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 WI2-2373I1.2A0A1W2PRP0 233 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 TMEM213A2RRL7 107 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 PRSS47A8MTI9 375 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 G3V4G9 280 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 CHEK1O14757 476 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 IGKV1-17P01599 117 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 IGLV1-51P01701 117 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 CSN3P07498 182 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 LYL1P12980 280 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 CRYBB3P26998 211 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 ERVFC1-1P60608 527 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 ZNF90Q03938 601 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 DEFB114Q30KQ6 69 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 ZFP69Q49AA0 526 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 UNQ9165/PRO28630Q6UXU0 137 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 SIGLEC15Q6ZMC9 328 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 BPIFA4PQ86YQ2 179 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 STXBP6Q8NFX7 210 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 GATAD1Q8WUU5 269 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 TMEM170AQ8WVE7 144 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 HYLS1Q96M11 299 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 RNF126Q9BV68 326 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 NPCDR1Q9BY65 106 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 PARD6GQ9BYG4 376 aaPredicted RBP3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 WDR61Q9GZS3 305 aaKnown RBP3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 DNAJC4Q9NNZ3 241 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 DOK5Q9P104 306 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 PXMP4Q9Y6I8 212 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 SVEP1Q4LDE5 3571 aa3.39□□□□□ -1.87
NSMCE4A-208ENST00000477289 TRAV2A0A0B4J234 112 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 IGHV3-66A0A0C4DH42 116 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 PMS2P5A8MQ11 134 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 HMSDA8MTL9 139 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 OR11H12B2RN74 326 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 PRSS46E5RG02 174 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 TEX46H3BTG2 121 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 TSPAN4O14817 238 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 C8orf88P0DMB2 117 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 TPT1P13693 172 aaKnown RBP3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 TFPI2P48307 235 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 CD81P60033 236 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 PLP1P60201 277 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 RAB2AP61019 212 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 RHOBP62745 196 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 SERF2P84101 59 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 ZNF345Q14585 488 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 OPCMLQ14982 345 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 VWC2Q2TAL6 325 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 FFAR4Q5NUL3 377 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 FAM74A1Q5RGS3 127 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 AKR1C8PQ5T2L2 129 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 C16orf54Q6UWD8 224 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 LINC00305Q7Z4B0 112 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 TCTE3Q8IZS6 198 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 GBGT1Q8N5D6 347 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 HSD17B11Q8NBQ5 300 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 STOML3Q8TAV4 291 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 MRAPQ8TCY5 172 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 MGST2Q99735 147 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 ZNF471Q9BX82 626 aaPredicted RBP3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 MRPL32Q9BYC8 188 aaKnown RBP3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 SLC25A39Q9BZJ4 359 aaPredicted RBP3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 ARV1Q9H2C2 271 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 C11orf1Q9H5F2 150 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 VSIRQ9H7M9 311 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 NRN1Q9NPD7 142 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 SLC39A9Q9NUM3 307 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 PPP1R14DQ9NXH3 145 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 CLEC5AQ9NY25 188 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 MRPL36Q9P0J6 103 aaKnown RBP3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 TNFSF18Q9UNG2 199 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 TIMM9Q9Y5J7 89 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 SMAD5-AS1Q9Y6J3 95 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 NOTCH3Q9UM47 2321 aa3.38□□□□□ -1.87
NSMCE4A-208ENST00000477289 IGKV1D-37A0A075B6S9 117 aa3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 ZNF98A6NK75 572 aa3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 H3BRN7 92 aa3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 BUB3O43684 328 aa3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 OR7C2O60412 319 aa3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 C1QBP02746 253 aa3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 PRSS2P07478 247 aa3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 M6PRP20645 277 aa3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 GATA2P23769 480 aaPredicted RBP3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 NUTF2P61970 127 aaKnown RBP3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 PSG9Q00887 426 aa3.37□□□□□ -1.87
NSMCE4A-208ENST00000477289 DEFA6Q01524 100 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms