RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 IFI27L1Q96BM0 104 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 HLA-DRB4X5D2U9 266 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 CHD8Q9HCK8 2581 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 DSCAMO60469 2012 aa12.15□□□□□ -0.46
CLSTN1-205ENST00000477264 hADV38S2A0JD32 116 aa12.15□□□□□ -0.47
CLSTN1-205ENST00000477264 TMEM8BA6NDV4 472 aa12.15□□□□□ -0.47
CLSTN1-205ENST00000477264 AGFG2O95081 481 aa12.15□□□□□ -0.47
CLSTN1-205ENST00000477264 TCTEX1D4Q5JR98 221 aa12.15□□□□□ -0.47
CLSTN1-205ENST00000477264 CIARTQ8N365 385 aaPredicted RBP12.15□□□□□ -0.47
CLSTN1-205ENST00000477264 C8orf46Q8TAG6 207 aa12.15□□□□□ -0.47
CLSTN1-205ENST00000477264 SRSF12Q8WXF0 261 aaKnown RBP12.15□□□□□ -0.47
CLSTN1-205ENST00000477264 FLYWCH2Q96CP2 140 aaKnown RBP12.15□□□□□ -0.47
CLSTN1-205ENST00000477264 K7EQM0 130 aa12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 IGLV2-11P01706 119 aa12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 THBDP07204 575 aa12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 PRNTQ86SH4 94 aa12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 MOGAT3Q86VF5 341 aa12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 ORMDL3Q8N138 153 aa12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 FAM169BQ8N8A8 192 aa12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 MRPL20Q9BYC9 149 aaKnown RBP12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 ZGRF1Q86YA3 2104 aa12.14□□□□□ -0.47
CLSTN1-205ENST00000477264 GAGE12HA6NDE8 117 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 VSTM5A8MXK1 200 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 MEF2CQ06413 473 aaPredicted RBP12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 OR4C13Q8NGP0 309 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 PRELID3AQ96N28 172 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 PRORYQ9H606 182 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 CGB1A6NKQ9 187 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 GATA4P43694 442 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 NMUP48645 174 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 TMEM116Q8NCL8 245 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 GTSF1LQ9H1H1 148 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 SH3BGRL2Q9UJC5 107 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 HIGD1AQ9Y241 93 aa12.13□□□□□ -0.47
CLSTN1-205ENST00000477264 FBLL1A6NHQ2 334 aaKnown RBP12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 FCGR2BP31994 310 aaPredicted RBP12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 SRSF1Q07955 248 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 MRPL36Q9P0J6 103 aaKnown RBP12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 DSPP15924 2871 aaKnown RBP12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 IGHV1-18A0A0C4DH31 117 aa12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 SMAGPQ0VAQ4 97 aa12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 FAM104BQ5XKR9 115 aa12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 GOLT1AQ6ZVE7 132 aa12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 RND1Q92730 232 aa12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 GAFA1Q96PS6 74 aa12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 SPANXB1Q9NS25 103 aaPredicted RBP12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 TSSC4Q9Y5U2 329 aaPredicted RBP12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 LINC00312Q9Y6C7 94 aa12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 PRR14LQ5THK1 2151 aa12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 TLN1Q9Y490 2541 aaKnown RBP12.12□□□□□ -0.47
CLSTN1-205ENST00000477264 D6R8Y8 96 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 PAX8Q06710 450 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 VMA21Q3ZAQ7 101 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 RNF7Q9UBF6 113 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 RP1L1Q8IWN7 2480 aaPredicted RBP12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 E7EUB6 86 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 GCSHP23434 173 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 PCP2Q8IVA1 136 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 LYPD1Q8N2G4 141 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 MTURNQ8N3F0 131 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 PHLDA1Q8WV24 401 aaPredicted RBP12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 CHAC1Q9BUX1 264 aa12.11□□□□□ -0.47
CLSTN1-205ENST00000477264 ZZEF1O43149 2961 aa12.1□□□□□ -0.47
CLSTN1-205ENST00000477264 TAL2Q16559 108 aa12.1□□□□□ -0.47
CLSTN1-205ENST00000477264 BCL6BQ8N143 479 aaPredicted RBP12.1□□□□□ -0.47
CLSTN1-205ENST00000477264 TRAV8-1A0A0A6YYK1 113 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 A0A1W2PPI3 338 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 LOXL1Q08397 574 aaPredicted RBP12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 SCGB2A2Q13296 93 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 TM2D2Q9BX73 214 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 SLC25A39Q9BZJ4 359 aaPredicted RBP12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 A0A1W2PRD5 423 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 A0A1W2PRF3 423 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 A0A1W2PRM7 423 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 E9PLD3 99 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 NDUFS7O75251 213 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 FAM106CPP0CH98 169 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 FXYD2P54710 66 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 FAM106AQ4KMX7 169 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 ZNF474Q6S9Z5 364 aaPredicted RBP12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 ZNF788Q6ZQV5 615 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 ZNF502Q8TBZ5 544 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 ZMAT4Q9H898 229 aa12.09□□□□□ -0.47
CLSTN1-205ENST00000477264 A0A0G2JNJ9 132 aa12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 C8orf31Q8N9H6 132 aa12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 Q9UFV3 132 aa12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 PSG8Q9UQ74 426 aa12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 F11RQ9Y624 299 aaKnown RBP12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 LINC01546A6NGU7 62 aa12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 IGLV2-23P01705 113 aa12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 LY6DQ14210 128 aa12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 C10orf55Q5SWW7 151 aa12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 RITA1Q96K30 269 aa12.08□□□□□ -0.48
CLSTN1-205ENST00000477264 LOC389332A0A1B0GUA5 103 aa12.07□□□□□ -0.48
CLSTN1-205ENST00000477264 ZNF785A8K8V0 405 aa12.07□□□□□ -0.48
CLSTN1-205ENST00000477264 GOSR1O95249 250 aa12.07□□□□□ -0.48
CLSTN1-205ENST00000477264 IGHV3-48P01763 117 aa12.07□□□□□ -0.48
CLSTN1-205ENST00000477264 CEND1Q8N111 149 aa12.07□□□□□ -0.48
CLSTN1-205ENST00000477264 SELENOKQ9Y6D0 94 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms