RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 PQLC2Q6ZP29 291 aa13.2□□□□□ -0.3
SREBF1-211ENST00000476994 RNF141Q8WVD5 230 aa13.2□□□□□ -0.3
SREBF1-211ENST00000476994 PAXXQ9BUH6 204 aa13.2□□□□□ -0.3
SREBF1-211ENST00000476994 MAP1LC3BQ9GZQ8 125 aa13.2□□□□□ -0.3
SREBF1-211ENST00000476994 OR51M1Q9H341 326 aa13.2□□□□□ -0.3
SREBF1-211ENST00000476994 ZNF586Q9NXT0 402 aa13.2□□□□□ -0.3
SREBF1-211ENST00000476994 AGRNO00468 2067 aa13.19□□□□□ -0.3
SREBF1-211ENST00000476994 TRAV1-1A0A0B4J248 108 aa13.19□□□□□ -0.3
SREBF1-211ENST00000476994 ZNF785A8K8V0 405 aa13.19□□□□□ -0.3
SREBF1-211ENST00000476994 IFNA7P01567 189 aa13.19□□□□□ -0.3
SREBF1-211ENST00000476994 HIST1H1EP10412 219 aaKnown RBP13.19□□□□□ -0.3
SREBF1-211ENST00000476994 GALR1P47211 349 aa13.19□□□□□ -0.3
SREBF1-211ENST00000476994 STXBP6Q8NFX7 210 aa13.19□□□□□ -0.3
SREBF1-211ENST00000476994 DCANP1Q8TF63 244 aa13.19□□□□□ -0.3
SREBF1-211ENST00000476994 HRH4Q9H3N8 390 aa13.19□□□□□ -0.3
SREBF1-211ENST00000476994 OR7C2O60412 319 aa13.18□□□□□ -0.3
SREBF1-211ENST00000476994 CXorf1O96002 111 aa13.18□□□□□ -0.3
SREBF1-211ENST00000476994 GCHFRP30047 84 aa13.18□□□□□ -0.3
SREBF1-211ENST00000476994 FGF8P55075 233 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-211ENST00000476994 LYPD6BQ8NI32 183 aa13.18□□□□□ -0.3
SREBF1-211ENST00000476994 SAT2Q96F10 170 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-211ENST00000476994 MS4A6AQ9H2W1 248 aa13.18□□□□□ -0.3
SREBF1-211ENST00000476994 NRN1Q9NPD7 142 aa13.18□□□□□ -0.3
SREBF1-211ENST00000476994 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
SREBF1-211ENST00000476994 TRAV2A0A0B4J234 112 aa13.17□□□□□ -0.3
SREBF1-211ENST00000476994 ZNF705EA8MWA4 302 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-211ENST00000476994 K7EQG2 157 aa13.17□□□□□ -0.3
SREBF1-211ENST00000476994 SLC17A3O00476 420 aa13.17□□□□□ -0.3
SREBF1-211ENST00000476994 NDUFB4O95168 129 aa13.17□□□□□ -0.3
SREBF1-211ENST00000476994 SNRPCP09234 159 aaKnown RBP13.17□□□□□ -0.3
SREBF1-211ENST00000476994 H2AFB1P0C5Y9 115 aa13.17□□□□□ -0.3
SREBF1-211ENST00000476994 OR10J4P0C629 311 aa13.17□□□□□ -0.3
SREBF1-211ENST00000476994 UBE2L3P68036 154 aaKnown RBP13.17□□□□□ -0.3
SREBF1-211ENST00000476994 SPAG8Q99932 426 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-211ENST00000476994 TMPRSS5Q9H3S3 457 aa13.17□□□□□ -0.3
SREBF1-211ENST00000476994 IGKV3-7A0A075B6H7 116 aa13.16□□□□□ -0.3
SREBF1-211ENST00000476994 TRBV19A0A075B6N1 114 aa13.16□□□□□ -0.3
SREBF1-211ENST00000476994 TRAV8-2A0A0B4J237 113 aa13.16□□□□□ -0.3
SREBF1-211ENST00000476994 H3BTX0 84 aa13.16□□□□□ -0.3
SREBF1-211ENST00000476994 NMBP08949 121 aa13.16□□□□□ -0.3
SREBF1-211ENST00000476994 ATF4P18848 351 aaPredicted RBP13.16□□□□□ -0.3
SREBF1-211ENST00000476994 RBPMS2Q6ZRY4 209 aaKnown RBP13.16□□□□□ -0.3
SREBF1-211ENST00000476994 GBGT1Q8N5D6 347 aa13.16□□□□□ -0.3
SREBF1-211ENST00000476994 FAM24BQ8N5W8 94 aa13.16□□□□□ -0.3
SREBF1-211ENST00000476994 SFT2D1Q8WV19 159 aa13.16□□□□□ -0.3
SREBF1-211ENST00000476994 C3orf84H3BNL1 204 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 ZNF253O75346 499 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 NBEAP1P0C6P0 100 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 MEOX2P50222 304 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 CCL20P78556 96 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 PDE6HQ13956 83 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 GUK1Q16774 197 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 LCN12Q6JVE5 192 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 ZNF767PQ75MW2 155 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 LRRC20Q8TCA0 184 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 ASCL2Q99929 193 aa13.15□□□□□ -0.3
SREBF1-211ENST00000476994 RGS13O14921 159 aa13.14□□□□□ -0.31
SREBF1-211ENST00000476994 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
SREBF1-211ENST00000476994 BLOC1S1P78537 153 aa13.14□□□□□ -0.31
SREBF1-211ENST00000476994 PCNPQ8WW12 178 aaKnown RBP13.14□□□□□ -0.31
SREBF1-211ENST00000476994 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-211ENST00000476994 TMEM167BQ9NRX6 74 aa13.14□□□□□ -0.31
SREBF1-211ENST00000476994 A0A1B0GV50 99 aa13.13□□□□□ -0.31
SREBF1-211ENST00000476994 TFPI2P48307 235 aa13.13□□□□□ -0.31
SREBF1-211ENST00000476994 BLNKQ8WV28 456 aa13.13□□□□□ -0.31
SREBF1-211ENST00000476994 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
SREBF1-211ENST00000476994 ISLRO14498 428 aa13.12□□□□□ -0.31
SREBF1-211ENST00000476994 HBE1P02100 147 aa13.12□□□□□ -0.31
SREBF1-211ENST00000476994 HLA-DMBP28068 263 aa13.12□□□□□ -0.31
SREBF1-211ENST00000476994 PMS2P11Q13670 270 aa13.12□□□□□ -0.31
SREBF1-211ENST00000476994 ODF3L2Q3SX64 289 aa13.12□□□□□ -0.31
SREBF1-211ENST00000476994 IGFL4Q6B9Z1 124 aa13.12□□□□□ -0.31
SREBF1-211ENST00000476994 WFDC3Q8IUB2 231 aa13.12□□□□□ -0.31
SREBF1-211ENST00000476994 SLC50A1Q9BRV3 221 aa13.12□□□□□ -0.31
SREBF1-211ENST00000476994 C19orf73Q9NVV2 129 aa13.12□□□□□ -0.31
SREBF1-211ENST00000476994 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
SREBF1-211ENST00000476994 PSMB3P49720 205 aa13.11□□□□□ -0.31
SREBF1-211ENST00000476994 PAFAH1B2P68402 229 aa13.11□□□□□ -0.31
SREBF1-211ENST00000476994 GUCA2BQ16661 112 aa13.11□□□□□ -0.31
SREBF1-211ENST00000476994 SAMD13Q5VXD3 122 aa13.11□□□□□ -0.31
SREBF1-211ENST00000476994 YTHDF2Q9Y5A9 579 aaKnown RBP13.11□□□□□ -0.31
SREBF1-211ENST00000476994 STAB2Q8WWQ8 2551 aa13.1□□□□□ -0.31
SREBF1-211ENST00000476994 DNASE2O00115 360 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-211ENST00000476994 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
SREBF1-211ENST00000476994 ARL2-SNX15V9GYD0 113 aa13.1□□□□□ -0.31
SREBF1-211ENST00000476994 A0A1W2PRE2 83 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 FAM74A7A6NL05 159 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 GGTLC3B5MD39 225 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 CD7P09564 240 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 ZNF688P0C7X2 276 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 CLLU1Q5K131 121 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 IQCF2Q8IXL9 164 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 LYPD1Q8N2G4 141 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 EXOC3-AS1Q8N2X6 119 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 RNF182Q8N6D2 247 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 C16orf92Q96LL3 132 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 FAM110AQ9BQ89 295 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 Q9H3A6 140 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 MAP6D1Q9H9H5 199 aa13.09□□□□□ -0.31
SREBF1-211ENST00000476994 RANP62826 216 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms