RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 OR4D5Q8NGN0 318 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 RAB2BQ8WUD1 216 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 TMEM263Q8WUH6 116 aaKnown RBP8.2□□□□□ -1.1
HDAC6-219ENST00000476625 AP3S1Q92572 193 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 PRRT1Q99946 306 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 PPP1R14DQ9NXH3 145 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 KCNIP3Q9Y2W7 256 aa8.2□□□□□ -1.1
HDAC6-219ENST00000476625 SMCO3A2RU48 225 aa8.19□□□□□ -1.1
HDAC6-219ENST00000476625 SLC17A3O00476 420 aa8.19□□□□□ -1.1
HDAC6-219ENST00000476625 MRPS12O15235 138 aaKnown RBP8.19□□□□□ -1.1
HDAC6-219ENST00000476625 OR5G3P0C626 314 aa8.19□□□□□ -1.1
HDAC6-219ENST00000476625 RRAS2P62070 204 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-219ENST00000476625 SAMD13Q5VXD3 122 aa8.19□□□□□ -1.1
HDAC6-219ENST00000476625 MORN5Q5VZ52 161 aa8.19□□□□□ -1.1
HDAC6-219ENST00000476625 TMEM256Q8N2U0 113 aa8.19□□□□□ -1.1
HDAC6-219ENST00000476625 RPUSD4Q96CM3 377 aaKnown RBP8.19□□□□□ -1.1
HDAC6-219ENST00000476625 SLC45A2Q9UMX9 530 aa8.19□□□□□ -1.1
HDAC6-219ENST00000476625 HIGD1AQ9Y241 93 aa8.19□□□□□ -1.1
HDAC6-219ENST00000476625 PMS2P5A8MQ11 134 aa8.18□□□□□ -1.1
HDAC6-219ENST00000476625 HOXB5P09067 269 aa8.18□□□□□ -1.1
HDAC6-219ENST00000476625 LINC00869P0C866 280 aa8.18□□□□□ -1.1
HDAC6-219ENST00000476625 CDKN1BP46527 198 aa8.18□□□□□ -1.1
HDAC6-219ENST00000476625 B2MP61769 119 aa8.18□□□□□ -1.1
HDAC6-219ENST00000476625 SSBP1Q04837 148 aaKnown RBP8.18□□□□□ -1.1
HDAC6-219ENST00000476625 CCDC190Q86UF4 302 aa8.18□□□□□ -1.1
HDAC6-219ENST00000476625 ZBTB8BQ8NAP8 495 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-219ENST00000476625 A0A087X0K7 114 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 TRAV12-3A0A0B4J271 114 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 SYNGR2O43760 224 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 RLN2P04090 185 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 IL5P05113 134 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 VAMP1P23763 118 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 OR10J6PQ8NGY7 276 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 LRRC20Q8TCA0 184 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 DIRAS2Q96HU8 199 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 GPR82Q96P67 336 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 ARL6Q9H0F7 186 aa8.17□□□□□ -1.1
HDAC6-219ENST00000476625 A0A1W2PPQ1 181 aa8.16□□□□□ -1.1
HDAC6-219ENST00000476625 H7BYZ3 331 aa8.16□□□□□ -1.1
HDAC6-219ENST00000476625 HYPMO75409 117 aa8.16□□□□□ -1.1
HDAC6-219ENST00000476625 ATP5IP56385 69 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-219ENST00000476625 RAP2BP61225 183 aa8.16□□□□□ -1.1
HDAC6-219ENST00000476625 POLR2GP62487 172 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC6-219ENST00000476625 MRPS10P82664 201 aaKnown RBP8.16□□□□□ -1.1
HDAC6-219ENST00000476625 SLC38A11Q08AI6 406 aa8.16□□□□□ -1.1
HDAC6-219ENST00000476625 ZNF493Q6ZR52 646 aa8.16□□□□□ -1.1
HDAC6-219ENST00000476625 C15orf40Q8WUR7 153 aa8.16□□□□□ -1.1
HDAC6-219ENST00000476625 CACFD1Q9UGQ2 172 aa8.16□□□□□ -1.1
HDAC6-219ENST00000476625 SCP2D1Q9UJQ7 156 aa8.16□□□□□ -1.1
HDAC6-219ENST00000476625 CTDSPLO15194 276 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 ADAP1O75689 374 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 NXPH4O95158 308 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 CFDP00746 253 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-219ENST00000476625 IGHV3-53P01767 116 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 CT45A10P0DMU9 189 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 ANXA3P12429 323 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 RPL7P18124 248 aaKnown RBP8.15□□□□□ -1.1
HDAC6-219ENST00000476625 PPP1R1AQ13522 171 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 Q6ZQT7 251 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 FRZBQ92765 325 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 ZNF503Q96F45 646 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 C18orf15Q96N68 181 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 ZNF331Q9NQX6 463 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-219ENST00000476625 GSN-AS1Q9NRJ2 163 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 RABL2AQ9UBK7 228 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-219ENST00000476625 RABL2BQ9UNT1 228 aa8.15□□□□□ -1.1
HDAC6-219ENST00000476625 DMBT1Q9UGM3 2413 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-219ENST00000476625 A0A087WTM6 91 aa8.14□□□□□ -1.11
HDAC6-219ENST00000476625 SNURFLB1AK76 121 aa8.14□□□□□ -1.11
HDAC6-219ENST00000476625 SIVA1O15304 175 aa8.14□□□□□ -1.11
HDAC6-219ENST00000476625 ANXA7P20073 488 aaKnown RBP8.14□□□□□ -1.11
HDAC6-219ENST00000476625 SRPXP78539 464 aa8.14□□□□□ -1.11
HDAC6-219ENST00000476625 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
HDAC6-219ENST00000476625 ARV1Q9H2C2 271 aa8.14□□□□□ -1.11
HDAC6-219ENST00000476625 STRAPQ9Y3F4 350 aaKnown RBP8.14□□□□□ -1.11
HDAC6-219ENST00000476625 KLF12Q9Y4X4 402 aa8.14□□□□□ -1.11
HDAC6-219ENST00000476625 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-219ENST00000476625 TRAV5A0A0B4J249 113 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 CCDC160A6NGH7 325 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 H3BQ15 152 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 SSSCA1O60232 199 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 MED6O75586 246 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 PLP1P60201 277 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 ERVFC1-1P60608 527 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 ARL16Q0P5N6 197 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 ERCC8Q13216 396 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 ICAM4Q14773 271 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 CCDC28AQ8IWP9 274 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 LRTM2Q8N967 370 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 ZNF431Q8TF32 576 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-219ENST00000476625 BATF3Q9NR55 127 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 PSENENQ9NZ42 101 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 RSL24D1Q9UHA3 163 aaKnown RBP8.13□□□□□ -1.11
HDAC6-219ENST00000476625 TP53TG3Q9ULZ0 132 aa8.13□□□□□ -1.11
HDAC6-219ENST00000476625 TRGV1A0A0A0MS02 117 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 DUXBA0A1W2PPF3 345 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 SFT2D2O95562 160 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 METTL15P1P0C7V9 234 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 CD300CQ08708 224 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms