RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 CHEK1O14757 476 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 UBE2L3P68036 154 aaKnown RBP6.7□□□□□ -1.34
VAPB-205ENST00000476395 TIMM23BQ5SRD1 257 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 ADAMTSL5Q6ZMM2 481 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 COL12A1Q99715 3063 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 IGLV3-9A0A075B6K5 115 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 IGKV1D-37A0A075B6S9 117 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 KBTBD11-OT1A0A1B0GTJ5 212 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 TEX50A0A1B0GTY4 177 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 GAGE12HA6NDE8 117 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 H3BRM9 83 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 EDN2P20800 178 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 HSPE1P61604 102 aaKnown RBP6.7□□□□□ -1.34
VAPB-205ENST00000476395 RTL8BQ17RB0 113 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 VSTM2AQ8TAG5 236 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 GNG12Q9UBI6 72 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 AMMECR1Q9Y4X0 333 aaPredicted RBP6.7□□□□□ -1.34
VAPB-205ENST00000476395 RNASE2P10153 161 aaKnown RBP6.7□□□□□ -1.34
VAPB-205ENST00000476395 AMTNQ6UX39 209 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 PATE2Q6UY27 113 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 ARPC1AQ92747 370 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 S1PR3Q99500 378 aa6.7□□□□□ -1.34
VAPB-205ENST00000476395 SLC25A10Q9UBX3 287 aaPredicted RBP6.7□□□□□ -1.34
VAPB-205ENST00000476395 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.69□□□□□ -1.34
VAPB-205ENST00000476395 NMUP48645 174 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 FXYD2P54710 66 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 PRCDQ00LT1 54 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 LINC01545Q5VT33 79 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 GRAMD2BQ96HH9 432 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 SIRPDQ9H106 197 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 FAM215AQ9Y5M1 114 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 LOC389332A0A1B0GUA5 103 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 PPIFP30405 207 aaKnown RBP6.69□□□□□ -1.34
VAPB-205ENST00000476395 MYCNOSP40205 109 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 SEC11AP67812 179 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 HBBP68871 147 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 DIAPH2-AS1Q14236 149 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 ITLN1Q8WWA0 313 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 PPDPFQ9H3Y8 114 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 TRAV8-1A0A0A6YYK1 113 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 UPK2O00526 184 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 SRSF2Q01130 221 aaKnown RBP6.69□□□□□ -1.34
VAPB-205ENST00000476395 ETDBQ3ZM63 59 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 LCNL1Q6ZST4 164 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 SLC25A48Q6ZT89 311 aaKnown RBP6.69□□□□□ -1.34
VAPB-205ENST00000476395 ASCL5Q7RTU5 278 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 TMEM178AQ8NBL3 297 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 OR9G4Q8NGQ1 327 aa6.69□□□□□ -1.34
VAPB-205ENST00000476395 FAM216BQ8N7L0 139 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 SLC25A33Q9BSK2 321 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 TMEM167BQ9NRX6 74 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 SMIM9A6NGZ8 99 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 C16orf97H3BN30 126 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 LTAP01374 205 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 APOHP02749 345 aaPredicted RBP6.68□□□□□ -1.34
VAPB-205ENST00000476395 RITA1Q96K30 269 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 SCNM1Q9BWG6 230 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 ZNF257Q9Y2Q1 563 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 ASH1LQ9NR48 2969 aaKnown RBP6.68□□□□□ -1.34
VAPB-205ENST00000476395 HRNRQ86YZ3 2850 aaPredicted RBP6.68□□□□□ -1.34
VAPB-205ENST00000476395 A0A096LNJ9 63 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 MBD3L4A6NDZ8 208 aaPredicted RBP6.68□□□□□ -1.34
VAPB-205ENST00000476395 MBD3L3A6NE82 208 aaPredicted RBP6.68□□□□□ -1.34
VAPB-205ENST00000476395 MBD3L5A6NJ08 208 aaPredicted RBP6.68□□□□□ -1.34
VAPB-205ENST00000476395 PEX7O00628 323 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 IGLV2-23P01705 113 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 GCSHP23434 173 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 UCNP55089 124 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 C2orf83Q53S99 150 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 SAMD5Q5TGI4 173 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 ZNF833PQ6ZTB9 187 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 ZNF329Q86UD4 541 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.68□□□□□ -1.34
VAPB-205ENST00000476395 MBD3L2Q8NHZ7 208 aaPredicted RBP6.68□□□□□ -1.34
VAPB-205ENST00000476395 SPAG8Q99932 426 aaPredicted RBP6.68□□□□□ -1.34
VAPB-205ENST00000476395 ZNF747Q9BV97 191 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 NDUFA4L2Q9NRX3 87 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 NBASA2RRP1 2371 aa6.68□□□□□ -1.34
VAPB-205ENST00000476395 A8MWL6 223 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 HAX1O00165 279 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 SAA1P0DJI8 122 aaPredicted RBP6.67□□□□□ -1.34
VAPB-205ENST00000476395 KIR2DS2P43631 304 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 CACNG7P62955 275 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 SPTA1P02549 2419 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 H3BMG7 143 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 MOSP00540 346 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 IGHV1-46P01743 117 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 OR5AL1P0C617 328 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 REG1BP48304 166 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 WT1-ASQ06250 92 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 MS4A6AQ9H2W1 248 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 A6NDN8 102 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 ZNF785A8K8V0 405 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 TNFRSF13BO14836 293 aaPredicted RBP6.67□□□□□ -1.34
VAPB-205ENST00000476395 SPRY3O43610 288 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 FABP2P12104 132 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 CCL11P51671 97 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 LRRC75A-AS1Q8N1F1 130 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 C20orf78Q9BR46 151 aa6.67□□□□□ -1.34
VAPB-205ENST00000476395 MRPL16Q9NX20 251 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms