RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 HIST1H1EP10412 219 aaKnown RBP16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 DEFB131AP59861 70 aa16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 LCN15Q6UWW0 184 aa16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 RAB24Q969Q5 203 aa16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 PAXXQ9BUH6 204 aa16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 ACTR3CQ9C0K3 210 aaPredicted RBP16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 OR51M1Q9H341 326 aa16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 ZNF586Q9NXT0 402 aa16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 BOLA1Q9Y3E2 137 aa16.48■□□□□ 0.23
MCF2L2-209ENST00000475664 TRAV8-2A0A0B4J237 113 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 H3BTX0 84 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 OR7C2O60412 319 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 ID1P41134 155 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 SNRPD3P62318 126 aaKnown RBP16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 ZNF726P1Q15940 193 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 GUK1Q16774 197 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 SSX7Q7RTT5 188 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 DEFB125Q8N687 156 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 FXYD5Q96DB9 178 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 C16orf92Q96LL3 132 aa16.47■□□□□ 0.23
MCF2L2-209ENST00000475664 UMAD1C9J7I0 102 aa16.46■□□□□ 0.23
MCF2L2-209ENST00000475664 HMGB3O15347 200 aaKnown RBP16.46■□□□□ 0.23
MCF2L2-209ENST00000475664 STAG3L2P0CL84 134 aa16.46■□□□□ 0.23
MCF2L2-209ENST00000475664 STAG3L3P0CL85 134 aa16.46■□□□□ 0.23
MCF2L2-209ENST00000475664 PSMG4Q5JS54 123 aa16.46■□□□□ 0.23
MCF2L2-209ENST00000475664 SAT2Q96F10 170 aaPredicted RBP16.46■□□□□ 0.23
MCF2L2-209ENST00000475664 TRBV19A0A075B6N1 114 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 CTXND1A0A1B0GTU2 59 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 SLC17A3O00476 420 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 OR10J4P0C629 311 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 IGHV4-30-4P0DP06 118 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 ZNF124Q15973 351 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 EIF5AL1Q6IS14 154 aaKnown RBP16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 PQLC2Q6ZP29 291 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 APRG1Q8IVJ8 170 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 RNF141Q8WVD5 230 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 CITED4Q96RK1 184 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 SLC50A1Q9BRV3 221 aa16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 ZNF331Q9NQX6 463 aaPredicted RBP16.45■□□□□ 0.22
MCF2L2-209ENST00000475664 A8MZ25 164 aa16.44■□□□□ 0.22
MCF2L2-209ENST00000475664 ZNF253O75346 499 aa16.44■□□□□ 0.22
MCF2L2-209ENST00000475664 NBEAP1P0C6P0 100 aa16.44■□□□□ 0.22
MCF2L2-209ENST00000475664 UBE2L3P68036 154 aaKnown RBP16.44■□□□□ 0.22
MCF2L2-209ENST00000475664 IGFL4Q6B9Z1 124 aa16.44■□□□□ 0.22
MCF2L2-209ENST00000475664 MRAPQ8TCY5 172 aa16.44■□□□□ 0.22
MCF2L2-209ENST00000475664 C20orf173Q96LM9 149 aa16.44■□□□□ 0.22
MCF2L2-209ENST00000475664 SRD5A3Q9H8P0 318 aa16.44■□□□□ 0.22
MCF2L2-209ENST00000475664 NDUFB4O95168 129 aa16.43■□□□□ 0.22
MCF2L2-209ENST00000475664 ARL14EPLP0DKL9 152 aa16.43■□□□□ 0.22
MCF2L2-209ENST00000475664 FHITP49789 147 aa16.43■□□□□ 0.22
MCF2L2-209ENST00000475664 PDE6HQ13956 83 aa16.43■□□□□ 0.22
MCF2L2-209ENST00000475664 LRRC20Q8TCA0 184 aa16.43■□□□□ 0.22
MCF2L2-209ENST00000475664 LINC00052Q96N35 136 aa16.43■□□□□ 0.22
MCF2L2-209ENST00000475664 HLA-DMBP28068 263 aa16.42■□□□□ 0.22
MCF2L2-209ENST00000475664 RNF182Q8N6D2 247 aa16.42■□□□□ 0.22
MCF2L2-209ENST00000475664 BLNKQ8WV28 456 aa16.42■□□□□ 0.22
MCF2L2-209ENST00000475664 DEFB121Q5J5C9 76 aa16.41■□□□□ 0.22
MCF2L2-209ENST00000475664 DPPA3Q6W0C5 159 aa16.41■□□□□ 0.22
MCF2L2-209ENST00000475664 PHYHIPLQ96FC7 376 aa16.41■□□□□ 0.22
MCF2L2-209ENST00000475664 CXorf1O96002 111 aa16.4■□□□□ 0.22
MCF2L2-209ENST00000475664 GCHFRP30047 84 aa16.4■□□□□ 0.22
MCF2L2-209ENST00000475664 FAM213BQ8TBF2 198 aa16.4■□□□□ 0.22
MCF2L2-209ENST00000475664 TUBA4BQ9H853 241 aa16.4■□□□□ 0.22
MCF2L2-209ENST00000475664 AGRNO00468 2067 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 MAP1LC3B2A6NCE7 125 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 RBMY1BA6NDE4 496 aaKnown RBP16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 RBMY1EA6NEQ0 496 aaKnown RBP16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 KNCNA6PVL3 124 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 RBMY1DP0C7P1 496 aaKnown RBP16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 FRMD6-AS1P0C7T7 363 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 SULT1A2P50226 295 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 RAB5CP51148 216 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 DEFB1P60022 68 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 PSG9Q00887 426 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 PSG3Q16557 428 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 LINC00322Q6ZN03 302 aaPredicted RBP16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 SUN5Q8TC36 379 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 MAP1LC3BQ9GZQ8 125 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 CLEC5AQ9NY25 188 aa16.39■□□□□ 0.21
MCF2L2-209ENST00000475664 FOXI2Q6ZQN5 318 aa16.38■□□□□ 0.21
MCF2L2-209ENST00000475664 ZNF738Q8NE65 137 aa16.38■□□□□ 0.21
MCF2L2-209ENST00000475664 MBD3L1Q8WWY6 194 aa16.38■□□□□ 0.21
MCF2L2-209ENST00000475664 FGF8P55075 233 aaPredicted RBP16.37■□□□□ 0.21
MCF2L2-209ENST00000475664 ACTL10Q5JWF8 245 aa16.37■□□□□ 0.21
MCF2L2-209ENST00000475664 FAM74A1Q5RGS3 127 aa16.37■□□□□ 0.21
MCF2L2-209ENST00000475664 GDF5OSQ5U4N7 250 aa16.37■□□□□ 0.21
MCF2L2-209ENST00000475664 SAV1Q9H4B6 383 aaPredicted RBP16.37■□□□□ 0.21
MCF2L2-209ENST00000475664 TMEM167BQ9NRX6 74 aa16.37■□□□□ 0.21
MCF2L2-209ENST00000475664 ALKAL2Q6UX46 152 aa16.36■□□□□ 0.21
MCF2L2-209ENST00000475664 EXOC3-AS1Q8N2X6 119 aa16.36■□□□□ 0.21
MCF2L2-209ENST00000475664 F6UB75 175 aa16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 HLA-DRB4P13762 266 aa16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 RANP62826 216 aaKnown RBP16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 ICAM4Q14773 271 aa16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 TRPT1Q86TN4 253 aaKnown RBP16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 LYPD1Q8N2G4 141 aa16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 RPUSD4Q96CM3 377 aaKnown RBP16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 MRPL53Q96EL3 112 aaKnown RBP16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 Q9H3A6 140 aa16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 AAMDCQ9H7C9 122 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms