RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 RNASE6Q93091 150 aaKnown RBP10.36□□□□□ -0.75
CCNL1-216ENST00000475298 RITA1Q96K30 269 aa10.36□□□□□ -0.75
CCNL1-216ENST00000475298 SLC25A2Q9BXI2 301 aa10.36□□□□□ -0.75
CCNL1-216ENST00000475298 PTPRQQ9UMZ3 2332 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 E7EQL1 145 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 PEX7O00628 323 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 TSPAN13O95857 204 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 CSN3P07498 182 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 C8orf88P0DMB2 117 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 LOXP28300 417 aaPredicted RBP10.35□□□□□ -0.75
CCNL1-216ENST00000475298 TAS2R45P59539 299 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 TMEM30BQ3MIR4 351 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 ZNF329Q86UD4 541 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 OSR1Q8TAX0 266 aaPredicted RBP10.35□□□□□ -0.75
CCNL1-216ENST00000475298 FLYWCH2Q96CP2 140 aaKnown RBP10.35□□□□□ -0.75
CCNL1-216ENST00000475298 PGLYRP4Q96LB8 373 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 C19orf24Q9BVV8 132 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 DYNLRB1Q9NP97 96 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 TPSG1Q9NRR2 321 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 NDUFA4L2Q9NRX3 87 aa10.35□□□□□ -0.75
CCNL1-216ENST00000475298 IGHV3-72A0A0B4J1Y9 119 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 CGB1A6NKQ9 187 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 SHISA9B4DS77 424 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 ATP5G2Q06055 141 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 SPTA1P02549 2419 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 TNFRSF13BO14836 293 aaPredicted RBP10.34□□□□□ -0.75
CCNL1-216ENST00000475298 SMIM13P0DJ93 91 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 WT1-ASQ06250 92 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 CD69Q07108 199 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 TMEM95Q3KNT9 176 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 TM4SF20Q53R12 229 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 SH2D6Q7Z4S9 175 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 OR1L8Q8NGR8 309 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 PHLDA1Q8WV24 401 aaPredicted RBP10.34□□□□□ -0.75
CCNL1-216ENST00000475298 PRSS22Q9GZN4 317 aa10.34□□□□□ -0.75
CCNL1-216ENST00000475298 A8MWL6 223 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 LYNX1G3V0Z9 82 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 LYNX1P0DP58 116 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 UBE2L3P68036 154 aaKnown RBP10.33□□□□□ -0.76
CCNL1-216ENST00000475298 TMEM177Q53S58 311 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 ASCL5Q7RTU5 278 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 RPP21Q9H633 154 aaKnown RBP10.33□□□□□ -0.76
CCNL1-216ENST00000475298 SOX21Q9Y651 276 aaPredicted RBP10.33□□□□□ -0.76
CCNL1-216ENST00000475298 NBASA2RRP1 2371 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 A0A096LNJ9 63 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 J3QR89 54 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 SLC25A17O43808 307 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 PLAUP00749 431 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 GATA3P23771 443 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 FXYD2P54710 66 aa10.33□□□□□ -0.76
CCNL1-216ENST00000475298 F8W1H4 67 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 IGLV2-23P01705 113 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
CCNL1-216ENST00000475298 APELAP0DMC3 54 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 PYYP10082 97 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 INSL3P51460 131 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 DLX6P56179 175 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 GNG5P63218 68 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 OR4C13Q8NGP0 309 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 AP5S1Q9NUS5 200 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 PGPEP1Q9NXJ5 209 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 MRPL36Q9P0J6 103 aaKnown RBP10.32□□□□□ -0.76
CCNL1-216ENST00000475298 K7ERJ3 54 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 ERHP84090 104 aaKnown RBP10.32□□□□□ -0.76
CCNL1-216ENST00000475298 ETDBQ3ZM63 59 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 MLST8Q9BVC4 326 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 MRPL16Q9NX20 251 aaKnown RBP10.32□□□□□ -0.76
CCNL1-216ENST00000475298 SIGLEC8Q9NYZ4 499 aa10.32□□□□□ -0.76
CCNL1-216ENST00000475298 ABCA4P78363 2273 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 A0A1W2PRD5 423 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 A0A1W2PRF3 423 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 A0A1W2PRM7 423 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 OVOL3O00110 214 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 ENSAO43768 121 aaKnown RBP10.31□□□□□ -0.76
CCNL1-216ENST00000475298 FAM106CPP0CH98 169 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 IGF2RP11717 2491 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 FAM106AQ4KMX7 169 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 MALRD1Q5VYJ5 2156 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 RUSC1-AS1Q66K80 236 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 TMEM167AQ8TBQ9 72 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 ARPC1AQ92747 370 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 F11RQ9Y624 299 aaKnown RBP10.31□□□□□ -0.76
CCNL1-216ENST00000475298 C19orf71A6NCJ1 209 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 TMEM155Q4W5P6 130 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 RBPMS2Q6ZRY4 209 aaKnown RBP10.31□□□□□ -0.76
CCNL1-216ENST00000475298 PDPNQ86YL7 162 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 SCNM1Q9BWG6 230 aa10.31□□□□□ -0.76
CCNL1-216ENST00000475298 CSMD1Q96PZ7 3565 aa10.3□□□□□ -0.76
CCNL1-216ENST00000475298 CHEK1O14757 476 aa10.3□□□□□ -0.76
CCNL1-216ENST00000475298 IGHV1-8P0DP01 117 aa10.3□□□□□ -0.76
CCNL1-216ENST00000475298 CNTFRP26992 372 aa10.3□□□□□ -0.76
CCNL1-216ENST00000475298 GRNP28799 593 aaKnown RBP10.3□□□□□ -0.76
CCNL1-216ENST00000475298 LGALS9BQ3B8N2 356 aa10.3□□□□□ -0.76
CCNL1-216ENST00000475298 CT83Q5H943 113 aa10.3□□□□□ -0.76
CCNL1-216ENST00000475298 LGALS9CQ6DKI2 356 aa10.3□□□□□ -0.76
CCNL1-216ENST00000475298 OR8A1Q8NGG7 326 aa10.3□□□□□ -0.76
CCNL1-216ENST00000475298 LINC01560Q8TB33 94 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms