RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 LEMD1Q68G75 181 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 TCF24Q7RTU0 167 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 SVBPQ8N300 66 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 SUN5Q8TC36 379 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 TXNDC17Q9BRA2 123 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 SLC25A2Q9BXI2 301 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 SEC11CQ9BY50 192 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 SIGLEC8Q9NYZ4 499 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 U3KQE9 123 aa7.89□□□□□ -1.15
COL12A1-206ENST00000474564 IGHV3OR16-13A0A075B7E8 117 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 IGHV3-74A0A0B4J1X5 117 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 TMEM213A2RRL7 107 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 PDE6DO43924 150 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 CSN1S1P47710 185 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 CMC4P56277 68 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-206ENST00000474564 PDE6HQ13956 83 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 LYPD1Q8N2G4 141 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 OR2K2Q8NGT1 345 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 CMTM2Q8TAZ6 248 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 BLNKQ8WV28 456 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 SLC50A1Q9BRV3 221 aa7.88□□□□□ -1.15
COL12A1-206ENST00000474564 K7EQM0 130 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 ZNF253O75346 499 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 CSN3P07498 182 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 SRP19P09132 144 aaKnown RBP7.87□□□□□ -1.15
COL12A1-206ENST00000474564 PYYP10082 97 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 SNRPD3P62318 126 aaKnown RBP7.87□□□□□ -1.15
COL12A1-206ENST00000474564 PMS2P11Q13670 270 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 HIST2H2BDQ6DRA6 164 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 LCN12Q6JVE5 192 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 LINC00482Q8N8I6 264 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 CYB561D1Q8N8Q1 229 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 GLMPQ8WWB7 406 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 RPUSD4Q96CM3 377 aaKnown RBP7.87□□□□□ -1.15
COL12A1-206ENST00000474564 FAM167A-AS1Q96KT0 104 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 C16orf92Q96LL3 132 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 NIPSNAP3BQ9BS92 247 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 NRN1Q9NPD7 142 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 RPH3ALQ9UNE2 315 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 ARL2-SNX15V9GYD0 113 aa7.87□□□□□ -1.15
COL12A1-206ENST00000474564 A0A087X0K7 114 aa7.86□□□□□ -1.15
COL12A1-206ENST00000474564 A0A1W2PRE2 83 aa7.86□□□□□ -1.15
COL12A1-206ENST00000474564 OR4C46A6NHA9 309 aa7.86□□□□□ -1.15
COL12A1-206ENST00000474564 ZNF727A8MUV8 499 aa7.86□□□□□ -1.15
COL12A1-206ENST00000474564 APOHP02749 345 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-206ENST00000474564 ATP5G3P48201 142 aa7.86□□□□□ -1.15
COL12A1-206ENST00000474564 RANP62826 216 aaKnown RBP7.86□□□□□ -1.15
COL12A1-206ENST00000474564 SMIM7Q9BQ49 75 aa7.86□□□□□ -1.15
COL12A1-206ENST00000474564 TCEAL7Q9BRU2 100 aa7.86□□□□□ -1.15
COL12A1-206ENST00000474564 PRELID1Q9Y255 219 aa7.86□□□□□ -1.15
COL12A1-206ENST00000474564 IGKV3-7A0A075B6H7 116 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 TRBV19A0A075B6N1 114 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 TRAV2A0A0B4J234 112 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 TMEM250H0YL14 139 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 SLC25A5P05141 298 aaKnown RBP7.85□□□□□ -1.15
COL12A1-206ENST00000474564 IGLC2P0DOY2 106 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 GP9P14770 177 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 AKR1C3P42330 323 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 GUCA2BQ16661 112 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 DEFB114Q30KQ6 69 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 MORN5Q5VZ52 161 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 FXYD5Q96DB9 178 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 SPAG8Q99932 426 aaPredicted RBP7.85□□□□□ -1.15
COL12A1-206ENST00000474564 OTORQ9NRC9 128 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 MLXQ9UH92 298 aa7.85□□□□□ -1.15
COL12A1-206ENST00000474564 CARHSP1Q9Y2V2 147 aaKnown RBP7.85□□□□□ -1.15
COL12A1-206ENST00000474564 PGPA6NDG6 321 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 FAM74A7A6NL05 159 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 ISLRO14498 428 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 TSPAN4O14817 238 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 SUMO1P63165 101 aaKnown RBP7.84□□□□□ -1.15
COL12A1-206ENST00000474564 FAM74A3Q4VXF1 159 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 PRR31Q5SQ13 230 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 WFDC3Q8IUB2 231 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 TVP23CQ96ET8 276 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 ZNF414Q96IQ9 312 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 ZNF586Q9NXT0 402 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 YTHDF2Q9Y5A9 579 aaKnown RBP7.84□□□□□ -1.15
COL12A1-206ENST00000474564 MAST4O15021 2626 aa7.84□□□□□ -1.15
COL12A1-206ENST00000474564 SERTM2A0A1B0GWG4 89 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 SCO2A0A1W2PP80 73 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 C9JQL5 133 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 H3BQ15 152 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 SNRPCP09234 159 aaKnown RBP7.83□□□□□ -1.16
COL12A1-206ENST00000474564 ADCYAP1P18509 176 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 TFPI2P48307 235 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 CNN1P51911 297 aaKnown RBP7.83□□□□□ -1.16
COL12A1-206ENST00000474564 CD81P60033 236 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 UBE2G1P62253 170 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 ADIRFQ15847 76 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 CD300EQ496F6 205 aaPredicted RBP7.83□□□□□ -1.16
COL12A1-206ENST00000474564 GBGT1Q8N5D6 347 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 ARL6IP6Q8N6S5 226 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.83□□□□□ -1.16
COL12A1-206ENST00000474564 C5orf17Q8NAS9 161 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 WFDC9Q8NEX5 89 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 MS4A6AQ9H2W1 248 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 PARLQ9H300 379 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 Q9H3A6 140 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 RPS10P5Q9NQ39 176 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms