RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 ZNF48Q96MX3 618 aaPredicted RBP16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 HYPMO75409 117 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 OR2J3O76001 311 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 CRYGBP07316 175 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 TMEM11P17152 192 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 LGALS7P47929 136 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 ATP5L2Q7Z4Y8 100 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 Q8N6K4 173 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 TXN2Q99757 166 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 NDUFA4L2Q9NRX3 87 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 HIVEP2P31629 2446 aa16.36■□□□□ 0.21
SMIM11A-204ENST00000474455 E7EUB6 86 aa16.36■□□□□ 0.21
SMIM11A-204ENST00000474455 BPIFB3P59826 476 aa16.36■□□□□ 0.21
SMIM11A-204ENST00000474455 LY6EQ16553 131 aa16.36■□□□□ 0.21
SMIM11A-204ENST00000474455 TMUB1Q9BVT8 246 aa16.36■□□□□ 0.21
SMIM11A-204ENST00000474455 ZNF430Q9H8G1 570 aaPredicted RBP16.36■□□□□ 0.21
SMIM11A-204ENST00000474455 MRPS16Q9Y3D3 137 aaKnown RBP16.36■□□□□ 0.21
SMIM11A-204ENST00000474455 H3BUX3 64 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 GATA2P23769 480 aaPredicted RBP16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 SLC35B1P78383 322 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 Q6ZN92 141 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 LAMTOR2Q9Y2Q5 125 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 SIGLEC9Q9Y336 463 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 NCBP2LA6PVI3 153 aaKnown RBP16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 PEX7O00628 323 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 COX7A2P2O60397 106 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 FAM106CPP0CH98 169 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 ZNF329Q86UD4 541 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 PAXXQ9BUH6 204 aa16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 GSX1Q9H4S2 264 aaPredicted RBP16.35■□□□□ 0.21
SMIM11A-204ENST00000474455 NBR2O15453 112 aa16.34■□□□□ 0.21
SMIM11A-204ENST00000474455 HIST1H1EP10412 219 aaKnown RBP16.34■□□□□ 0.21
SMIM11A-204ENST00000474455 VMA21Q3ZAQ7 101 aa16.34■□□□□ 0.21
SMIM11A-204ENST00000474455 C10orf55Q5SWW7 151 aa16.34■□□□□ 0.21
SMIM11A-204ENST00000474455 C10orf113Q5VZT2 155 aa16.34■□□□□ 0.21
SMIM11A-204ENST00000474455 TMEM167AQ8TBQ9 72 aa16.34■□□□□ 0.21
SMIM11A-204ENST00000474455 ORAOV1Q8WV07 137 aa16.34■□□□□ 0.21
SMIM11A-204ENST00000474455 F8P00451 2351 aa16.34■□□□□ 0.21
SMIM11A-204ENST00000474455 SUB1P53999 127 aaKnown RBP eCLIP16.33■□□□□ 0.21
SMIM11A-204ENST00000474455 SLAQ13239 276 aa16.33■□□□□ 0.21
SMIM11A-204ENST00000474455 THAP8Q8NA92 274 aa16.33■□□□□ 0.21
SMIM11A-204ENST00000474455 STXBP6Q8NFX7 210 aa16.33■□□□□ 0.21
SMIM11A-204ENST00000474455 NPBQ8NG41 125 aa16.33■□□□□ 0.21
SMIM11A-204ENST00000474455 RNF5Q99942 180 aa16.33■□□□□ 0.21
SMIM11A-204ENST00000474455 TNFRSF19Q9NS68 423 aa16.33■□□□□ 0.21
SMIM11A-204ENST00000474455 SH2D7A6NKC9 451 aaPredicted RBP16.33■□□□□ 0.2
SMIM11A-204ENST00000474455 NDUFA3O95167 84 aa16.33■□□□□ 0.2
SMIM11A-204ENST00000474455 IGHV4-59P01825 116 aa16.33■□□□□ 0.2
SMIM11A-204ENST00000474455 RPL8P62917 257 aaKnown RBP16.33■□□□□ 0.2
SMIM11A-204ENST00000474455 SSBP2P81877 361 aaPredicted RBP16.33■□□□□ 0.2
SMIM11A-204ENST00000474455 C9orf139Q6ZV77 190 aa16.33■□□□□ 0.2
SMIM11A-204ENST00000474455 TEX45Q8NA69 505 aa16.33■□□□□ 0.2
SMIM11A-204ENST00000474455 VSTM2AQ8TAG5 236 aa16.33■□□□□ 0.2
SMIM11A-204ENST00000474455 TCRBV4S1A1TA0A5B7 111 aa16.32■□□□□ 0.2
SMIM11A-204ENST00000474455 HSBP1O75506 76 aa16.32■□□□□ 0.2
SMIM11A-204ENST00000474455 MFAP2P55001 183 aa16.32■□□□□ 0.2
SMIM11A-204ENST00000474455 PLGLAQ15195 96 aa16.32■□□□□ 0.2
SMIM11A-204ENST00000474455 PPP1R27Q86WC6 154 aa16.32■□□□□ 0.2
SMIM11A-204ENST00000474455 Q8N9W7 124 aa16.32■□□□□ 0.2
SMIM11A-204ENST00000474455 NUP35Q8NFH5 326 aa16.32■□□□□ 0.2
SMIM11A-204ENST00000474455 NUDT10Q8NFP7 164 aa16.32■□□□□ 0.2
SMIM11A-204ENST00000474455 NUDT11Q96G61 164 aa16.32■□□□□ 0.2
SMIM11A-204ENST00000474455 TRAV9-2A0A087WT02 112 aa16.31■□□□□ 0.2
SMIM11A-204ENST00000474455 TRAV5A0A0B4J249 113 aa16.31■□□□□ 0.2
SMIM11A-204ENST00000474455 CGB1A6NKQ9 187 aa16.31■□□□□ 0.2
SMIM11A-204ENST00000474455 NTF3P20783 257 aa16.31■□□□□ 0.2
SMIM11A-204ENST00000474455 ALKBH7Q9BT30 221 aaPredicted RBP16.31■□□□□ 0.2
SMIM11A-204ENST00000474455 ZNF355PQ9NSJ1 428 aa16.31■□□□□ 0.2
SMIM11A-204ENST00000474455 MLANAQ16655 118 aa16.31■□□□□ 0.2
SMIM11A-204ENST00000474455 C5orf64Q2M2E5 130 aa16.31■□□□□ 0.2
SMIM11A-204ENST00000474455 FAM181BA6NEQ2 426 aa16.3■□□□□ 0.2
SMIM11A-204ENST00000474455 MYCNOSP40205 109 aa16.3■□□□□ 0.2
SMIM11A-204ENST00000474455 FAM19A2Q8N3H0 131 aa16.3■□□□□ 0.2
SMIM11A-204ENST00000474455 OR10W1Q8NGF6 305 aa16.3■□□□□ 0.2
SMIM11A-204ENST00000474455 OR2T6Q8NHC8 308 aa16.3■□□□□ 0.2
SMIM11A-204ENST00000474455 C1RLQ9NZP8 487 aa16.3■□□□□ 0.2
SMIM11A-204ENST00000474455 M0R2Z0 102 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 APELAP0DMC3 54 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 TNXAQ16473 311 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 CT83Q5H943 113 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 STPG4Q8N801 248 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 FXYD5Q96DB9 178 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 A0A1B0GXF2 115 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 A6NDX4 124 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 CA1P00915 261 aaPredicted RBP16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 TSPOP30536 169 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 TFPI2P48307 235 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 UBE2G1P62253 170 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 MORN5Q5VZ52 161 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 Q6YL49 198 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 DUX5Q96PT3 197 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 KLF12Q9Y4X4 402 aa16.29■□□□□ 0.2
SMIM11A-204ENST00000474455 NDUFB8O95169 186 aa16.28■□□□□ 0.2
SMIM11A-204ENST00000474455 GDF5OSQ5U4N7 250 aa16.28■□□□□ 0.2
SMIM11A-204ENST00000474455 PATE2Q6UY27 113 aa16.28■□□□□ 0.2
SMIM11A-204ENST00000474455 NHLRC2Q8NBF2 726 aa16.28■□□□□ 0.2
SMIM11A-204ENST00000474455 WNT10AQ9GZT5 417 aa16.28■□□□□ 0.2
SMIM11A-204ENST00000474455 NF1P21359 2839 aa16.28■□□□□ 0.2
SMIM11A-204ENST00000474455 HOXA3O43365 443 aaPredicted RBP16.27■□□□□ 0.2
SMIM11A-204ENST00000474455 DMRTA1Q5VZB9 504 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms