RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 V9GYY9 64 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 PCSK5Q92824 1860 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 C2orf16Q68DN1 1984 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 IGKV2D-26A0A0A0MRZ7 120 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 A0A1W2PQD3 144 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 CRYGAP11844 174 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 TMEM258P61165 79 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 NNATQ16517 81 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 TXNDC8Q6A555 127 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 GAGE2AQ6NT46 116 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 SIGLEC15Q6ZMC9 328 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 RFESDQ8TAC1 157 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 IGFBPL1Q8WX77 278 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 TMEM190Q8WZ59 177 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 ZNF488Q96MN9 340 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 PRSS22Q9GZN4 317 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 HHLA3Q9XRX5 114 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 ARID1BQ8NFD5 2236 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 LOC107984156A0A0G2JMH3 177 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 IGLV2-14P01704 120 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 ARL17AQ8IVW1 177 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 TRGV9Q99603 122 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 PEMTQ9UBM1 199 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 GON4LQ3T8J9 2241 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 IGKCP01834 107 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 LGALS1P09382 135 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 CD7P09564 240 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 IGLV3-21P80748 117 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 IL11RAQ14626 422 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 GJC3Q8NFK1 279 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 RNF138Q8WVD3 245 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 MMABQ96EY8 250 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 AMMECR1Q9Y4X0 333 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 PRSS46E5RG02 174 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 PEX7O00628 323 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 SLC25A20O43772 301 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 LINC00271P0C7V0 271 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 UBE2D1P51668 147 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 ZNF415Q09FC8 603 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 RIGQ13278 110 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 DAZAP2Q15038 168 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 TWIST1Q15672 202 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 KRTAP27-1Q3LI81 207 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 HRCT1Q6UXD1 115 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 ZNF493Q6ZR52 646 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 SLC25A48Q6ZT89 311 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 MIR17HGQ75NE6 70 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 SPTSSAQ969W0 71 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 PGLYRP4Q96LB8 373 aa4.04□□□□□ -1.76
TMEM39A-206ENST00000473684 C5orf63A6NC05 138 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 RBAKDNA6NC62 111 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 SRRM4A7MD48 611 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 H3BVH4 76 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 K7ENP7 123 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 TIMM23O14925 209 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 DPM2O94777 84 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 P01737 135 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 WT1P19544 449 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 CD24P25063 80 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 ZNF137PP52743 207 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 LINC00596Q86U02 117 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 AMN1Q8IY45 258 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 SSMEM1Q8WWF3 244 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 ELSPBP1Q96BH3 223 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 PRORYQ9H606 182 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 MYO9BQ13459 2157 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 IGHV3OR15-7A0A075B7D8 119 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 A0A0J9YW62 118 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 WI2-2373I1.2A0A1W2PRP0 233 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 M0R135 149 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 TCL1BO95988 128 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 COX7CP15954 63 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 FCER1GP30273 86 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 FGF12P61328 243 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 EBI3Q14213 229 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 C4orf26Q17RF5 130 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 RSPO1Q2MKA7 263 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 TMEM52BQ4KMG9 183 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 Q5XG85 94 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 POM121L12Q8N7R1 296 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 DPH3Q96FX2 82 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 ZNF799Q96GE5 643 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 SNRNP200O75643 2136 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 MYO7BQ6PIF6 2116 aa4.03□□□□□ -1.76
TMEM39A-206ENST00000473684 TMSB15BA0A087X1C1 80 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 C19orf71A6NCJ1 209 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 LINC01549A6NIU2 74 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 LINC01548A6NM66 108 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 NCBP2LA6PVI3 153 aaKnown RBP4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 OVOL1O14753 267 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 HLA-DMBP28068 263 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 IFI27P40305 119 aaPredicted RBP4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 PAX8Q06710 450 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 ZFP2Q6ZN57 461 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 DRAM1Q8N682 238 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 MRPL20Q9BYC9 149 aaKnown RBP4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 JPT2Q9H910 190 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 U3KQK5 164 aa4.03□□□□□ -1.77
TMEM39A-206ENST00000473684 FAM236AA0A1B0GUQ0 79 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms