RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 C1RLQ9NZP8 487 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 FN1P02751 2386 aaKnown RBP11.7□□□□□ -0.54
LMNA-213ENST00000473598 A0A1W2PS18 150 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 CA2P00918 260 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
LMNA-213ENST00000473598 GNB1P62873 340 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 SSBP2P81877 361 aaPredicted RBP11.7□□□□□ -0.54
LMNA-213ENST00000473598 ACSM6Q6P461 480 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 GTF2H5Q6ZYL4 71 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 GNB1LQ9BYB4 327 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 WNT10AQ9GZT5 417 aa11.7□□□□□ -0.54
LMNA-213ENST00000473598 MXRA5Q9NR99 2828 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 PRSS46E5RG02 174 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 MT-CO2P00403 227 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 UFSP1Q6NVU6 142 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 Q8N9W7 124 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 C5orf17Q8NAS9 161 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 IL36BQ9NZH7 164 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
LMNA-213ENST00000473598 MPV17L2Q567V2 206 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 NEGR1Q7Z3B1 354 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 BCL6BQ8N143 479 aaPredicted RBP11.69□□□□□ -0.54
LMNA-213ENST00000473598 OR1N2Q8NGR9 330 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 WDR83OSQ9Y284 106 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 NF1P21359 2839 aa11.69□□□□□ -0.54
LMNA-213ENST00000473598 INAFM1C9JVW0 142 aa11.68□□□□□ -0.54
LMNA-213ENST00000473598 GNG7O60262 68 aa11.68□□□□□ -0.54
LMNA-213ENST00000473598 NPY1RP25929 384 aa11.68□□□□□ -0.54
LMNA-213ENST00000473598 ERHP84090 104 aaKnown RBP11.68□□□□□ -0.54
LMNA-213ENST00000473598 ZNF90Q03938 601 aa11.68□□□□□ -0.54
LMNA-213ENST00000473598 WT1-ASQ06250 92 aa11.68□□□□□ -0.54
LMNA-213ENST00000473598 C9orf139Q6ZV77 190 aa11.68□□□□□ -0.54
LMNA-213ENST00000473598 IL17RELQ6ZVW7 336 aa11.68□□□□□ -0.54
LMNA-213ENST00000473598 ERASQ7Z444 233 aa11.68□□□□□ -0.54
LMNA-213ENST00000473598 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
LMNA-213ENST00000473598 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
LMNA-213ENST00000473598 PMCHP20382 165 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 DEFB112Q30KQ8 113 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 NAV3Q8IVL0 2385 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 H3BUX3 64 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 CNIH1O95406 144 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 LINC00869P0C866 280 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 IGLL1P15814 213 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 NPPCP23582 126 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 ATP5IP56385 69 aaPredicted RBP11.67□□□□□ -0.54
LMNA-213ENST00000473598 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 SLC25A33Q9BSK2 321 aa11.67□□□□□ -0.54
LMNA-213ENST00000473598 SSBP4Q9BWG4 385 aaPredicted RBP11.67□□□□□ -0.54
LMNA-213ENST00000473598 GAGE10A6NGK3 116 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 TEX22C9J3V5 150 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 C11orf94C9JXX5 98 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 PAGE4O60829 102 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 OR10J4P0C629 311 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 RNASE2P10153 161 aaKnown RBP11.66□□□□□ -0.54
LMNA-213ENST00000473598 FXYD3Q14802 87 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 MRPL54Q6P161 138 aaKnown RBP11.66□□□□□ -0.54
LMNA-213ENST00000473598 TMEM219Q86XT9 240 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 TEX29Q8N6K0 151 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 OR10G9Q8NGN4 311 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 OR10G7Q8NGN6 311 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 RASL11BQ9BPW5 248 aa11.66□□□□□ -0.54
LMNA-213ENST00000473598 TRAV8-6A0A0B4J262 113 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 SNURFLB1AK76 121 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 MPDU1O75352 247 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 HLA-DRB1P01911 266 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 CX3CL1P78423 397 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 TREML4Q6UXN2 200 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 SRSF8Q9BRL6 282 aaKnown RBP11.65□□□□□ -0.54
LMNA-213ENST00000473598 KCNIP2Q9NS61 270 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 MOB4Q9Y3A3 225 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 A6NDX4 124 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 NUDT3O95989 172 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 C5orf56Q8N8D9 126 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 SSMEM1Q8WWF3 244 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 SIGMAR1Q99720 223 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 TXNDC17Q9BRA2 123 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 SLC25A22Q9H936 323 aa11.65□□□□□ -0.54
LMNA-213ENST00000473598 IGHV7-81A0A0B4J1V7 117 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 MUC21A0A0G2JKD1 596 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 MUC21A0A140T8X8 626 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 AZU1P20160 251 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 LY6EQ16553 131 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 MUC21Q5SSG8 566 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 ATOH7Q8N100 152 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 APELAP0DMC3 54 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 AREGP15514 252 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 IER3P46695 156 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 SUB1P53999 127 aaKnown RBP eCLIP11.64□□□□□ -0.556e-11■■■■■ 66.2
LMNA-213ENST00000473598 TCTEX1D4Q5JR98 221 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 ZNF114Q8NC26 417 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 STXBP6Q8NFX7 210 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 GATAD1Q8WUU5 269 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
LMNA-213ENST00000473598 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
LMNA-213ENST00000473598 RAB9AP51151 201 aa11.63□□□□□ -0.55
LMNA-213ENST00000473598 NDPQ00604 133 aa11.63□□□□□ -0.55
LMNA-213ENST00000473598 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
LMNA-213ENST00000473598 NPVFQ9HCQ7 196 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms