RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 TRGV2A0A075B6R0 118 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 OVOL1O14753 267 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 RPL36AP83881 106 aaKnown RBP7.29□□□□□ -1.24
COL6A3-210ENST00000473258 RPL36ALQ969Q0 106 aaKnown RBP7.29□□□□□ -1.24
COL6A3-210ENST00000473258 C4AP0C0L4 1744 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 C4BP0C0L5 1744 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 IGHV3OR16-8A0A075B7F1 116 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 OOSP1A8MZH6 123 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 B9A039 149 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 E9PLD3 99 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 JMJD7-PLA2G4BH0Y9G9 81 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 IFI6P09912 130 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 LIFP15018 202 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 C11orf52Q96A22 123 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 FANCD2OSQ96PS1 177 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 LINC01587Q99440 93 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 SCN2AQ99250 2005 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 CSRP3P50461 194 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 ITLN1Q8WWA0 313 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 METRNQ9UJH8 293 aa7.29□□□□□ -1.24
COL6A3-210ENST00000473258 INTS1Q8N201 2190 aaKnown RBP7.29□□□□□ -1.24
COL6A3-210ENST00000473258 IGHV3-23P01764 117 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 MYOD1P15172 320 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 EFNA4P52798 201 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 PSG7Q13046 419 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 Q6Q795 121 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 PIK3C2BO00750 1634 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 LINC00173Q6ZV60 143 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 MLST8Q9BVC4 326 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 FAM60AQ9NP50 221 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 SERP1Q9Y6X1 66 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 KCPQ6ZWJ8 1503 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 J3QLI3 93 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 SERTAD4-AS1Q5TG53 156 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 Q6ZNB5 142 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 WBP1Q96G27 269 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 TIMM17AQ99595 171 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
COL6A3-210ENST00000473258 A0A087WV48 116 aa7.27□□□□□ -1.24
COL6A3-210ENST00000473258 PDE6HQ13956 83 aa7.27□□□□□ -1.24
COL6A3-210ENST00000473258 IGKV1-9A0A0C4DH69 117 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 MRPS36P82909 103 aaKnown RBP7.27□□□□□ -1.25
COL6A3-210ENST00000473258 RHOHQ15669 191 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 C1orf210Q8IVY1 113 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 TIAM2Q8IVF5 1701 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 ARHGEF17Q96PE2 2063 aaPredicted RBP7.27□□□□□ -1.25
COL6A3-210ENST00000473258 C15orf62A8K5M9 175 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 TCL1BO95988 128 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 UBE2BP63146 152 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 C11orf44Q8N8P7 122 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 Q8TAT8 98 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
COL6A3-210ENST00000473258 MSRB2Q9Y3D2 182 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 SCN5AQ14524 2016 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 RNF138Q8WVD3 245 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 TRGV9Q99603 122 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 OTOFQ9HC10 1997 aa7.27□□□□□ -1.25
COL6A3-210ENST00000473258 TRAV4A0A0B4J268 109 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 RPL18AQ02543 176 aaKnown RBP7.26□□□□□ -1.25
COL6A3-210ENST00000473258 ZGRF1Q86YA3 2104 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 RBAKDNA6NC62 111 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 LGALS9O00182 355 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 SDIM1Q6ZPB5 146 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 DYNAPQ8N1N2 210 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 PHLPP1O60346 1717 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 PEBP1P30086 187 aaKnown RBP7.26□□□□□ -1.25
COL6A3-210ENST00000473258 C5orf24Q7Z6I8 188 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 UPK3BQ9BT76 320 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 PROP1O75360 226 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 IL15RAQ13261 267 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 TEX49A0A1B0GTD5 131 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 CFPP27918 469 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 TRIP6Q15654 476 aaKnown RBP7.26□□□□□ -1.25
COL6A3-210ENST00000473258 NREPQ16612 68 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 ATP5EP2Q5VTU8 51 aa7.26□□□□□ -1.25
COL6A3-210ENST00000473258 TM4SF5O14894 197 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 DEFB124Q8NES8 71 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 COX14Q96I36 57 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 TTTY13Q9BZ97 58 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 FER1L4A9Z1Z3 1794 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 SCN3AQ9NY46 2000 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 PPLO60437 1756 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 UBE2E1P51965 193 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 EIF4EBP2Q13542 120 aaPredicted RBP7.25□□□□□ -1.25
COL6A3-210ENST00000473258 LMO7DNF2Z398 122 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 LTAP01374 205 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 HIST2H2BCQ6DN03 193 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 HIST2H2BDQ6DRA6 164 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 ANKRD31Q8N7Z5 1873 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 SPTY2D1-AS1A0A0U1RR47 76 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 J3QKU1 62 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 CCL3P10147 92 aa7.25□□□□□ -1.25
COL6A3-210ENST00000473258 COL2A1P02458 1487 aaPredicted RBP7.24□□□□□ -1.25
COL6A3-210ENST00000473258 TRGV3P03979 118 aa7.24□□□□□ -1.25
COL6A3-210ENST00000473258 SAA2P0DJI9 122 aaPredicted RBP7.24□□□□□ -1.25
COL6A3-210ENST00000473258 MYOM1P52179 1685 aa7.24□□□□□ -1.25
COL6A3-210ENST00000473258 USP17L23D6RBM5 183 aa7.24□□□□□ -1.25
COL6A3-210ENST00000473258 DEFB109BQ30KR1 87 aa7.24□□□□□ -1.25
COL6A3-210ENST00000473258 ZNF497Q6ZNH5 498 aa7.24□□□□□ -1.25
COL6A3-210ENST00000473258 TMEM75Q8N9X5 138 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms