RNA–Protein interactions for RNA: ENST00000473222.1

NR1H3-218, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-218ENST00000473222 ZNF688P0C7X2 276 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 IGHV4-30-4P0DP06 118 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 NKX2-5P52952 324 aaPredicted RBP13.16□□□□□ -0.3
NR1H3-218ENST00000473222 AKR1C8PQ5T2L2 129 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 MRAPQ8TCY5 172 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 RAB24Q969Q5 203 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 ZNF503Q96F45 646 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 C16orf92Q96LL3 132 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 CITED4Q96RK1 184 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 PAXXQ9BUH6 204 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 ACTR3CQ9C0K3 210 aaPredicted RBP13.16□□□□□ -0.3
NR1H3-218ENST00000473222 WFDC10AQ9H1F0 79 aa13.16□□□□□ -0.3
NR1H3-218ENST00000473222 PRKDCP78527 4128 aaKnown RBP13.15□□□□□ -0.3
NR1H3-218ENST00000473222 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.3
NR1H3-218ENST00000473222 NBEAP1P0C6P0 100 aa13.15□□□□□ -0.3
NR1H3-218ENST00000473222 PYYP10082 97 aa13.15□□□□□ -0.3
NR1H3-218ENST00000473222 CDC34P49427 236 aaPredicted RBP13.15□□□□□ -0.3
NR1H3-218ENST00000473222 KHDC3LQ587J8 217 aa13.15□□□□□ -0.3
NR1H3-218ENST00000473222 LCN15Q6UWW0 184 aa13.15□□□□□ -0.3
NR1H3-218ENST00000473222 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
NR1H3-218ENST00000473222 APRG1Q8IVJ8 170 aa13.15□□□□□ -0.3
NR1H3-218ENST00000473222 RNF141Q8WVD5 230 aa13.15□□□□□ -0.3
NR1H3-218ENST00000473222 ZNF331Q9NQX6 463 aaPredicted RBP13.15□□□□□ -0.3
NR1H3-218ENST00000473222 TRBV19A0A075B6N1 114 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 UMAD1C9J7I0 102 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 ZNF253O75346 499 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 SNRPCP09234 159 aaKnown RBP13.14□□□□□ -0.31
NR1H3-218ENST00000473222 STAG3L2P0CL84 134 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 STAG3L3P0CL85 134 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 PSMG4Q5JS54 123 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 PQLC2Q6ZP29 291 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 LRRC20Q8TCA0 184 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 FXYD5Q96DB9 178 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 SLC50A1Q9BRV3 221 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 TUBA4BQ9H853 241 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 SRD5A3Q9H8P0 318 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 CLEC5AQ9NY25 188 aa13.14□□□□□ -0.31
NR1H3-218ENST00000473222 OR7C2O60412 319 aa13.13□□□□□ -0.31
NR1H3-218ENST00000473222 PDE6HQ13956 83 aa13.13□□□□□ -0.31
NR1H3-218ENST00000473222 ZNF726P1Q15940 193 aa13.13□□□□□ -0.31
NR1H3-218ENST00000473222 ZNF124Q15973 351 aa13.13□□□□□ -0.31
NR1H3-218ENST00000473222 EIF5AL1Q6IS14 154 aaKnown RBP13.13□□□□□ -0.31
NR1H3-218ENST00000473222 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
NR1H3-218ENST00000473222 LINC00052Q96N35 136 aa13.13□□□□□ -0.31
NR1H3-218ENST00000473222 DNAH9Q9NYC9 4486 aa13.12□□□□□ -0.31
NR1H3-218ENST00000473222 CTXND1A0A1B0GTU2 59 aa13.12□□□□□ -0.31
NR1H3-218ENST00000473222 RBMY1BA6NDE4 496 aaKnown RBP13.12□□□□□ -0.31
NR1H3-218ENST00000473222 RBMY1EA6NEQ0 496 aaKnown RBP13.12□□□□□ -0.31
NR1H3-218ENST00000473222 H3BTX0 84 aa13.12□□□□□ -0.31
NR1H3-218ENST00000473222 EIF3GO75821 320 aaKnown RBP eCLIP13.12□□□□□ -0.31
NR1H3-218ENST00000473222 NDUFB4O95168 129 aa13.12□□□□□ -0.31
NR1H3-218ENST00000473222 RBMY1DP0C7P1 496 aaKnown RBP13.12□□□□□ -0.31
NR1H3-218ENST00000473222 PSG3Q16557 428 aa13.12□□□□□ -0.31
NR1H3-218ENST00000473222 IGFL4Q6B9Z1 124 aa13.12□□□□□ -0.31
NR1H3-218ENST00000473222 TMED6Q8WW62 240 aa13.12□□□□□ -0.31
NR1H3-218ENST00000473222 SLC17A3O00476 420 aa13.11□□□□□ -0.31
NR1H3-218ENST00000473222 HMGB3O15347 200 aaKnown RBP13.11□□□□□ -0.31
NR1H3-218ENST00000473222 OR10J4P0C629 311 aa13.11□□□□□ -0.31
NR1H3-218ENST00000473222 FRMD6-AS1P0C7T7 363 aa13.11□□□□□ -0.31
NR1H3-218ENST00000473222 SSX7Q7RTT5 188 aa13.11□□□□□ -0.31
NR1H3-218ENST00000473222 SUN5Q8TC36 379 aa13.11□□□□□ -0.31
NR1H3-218ENST00000473222 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
NR1H3-218ENST00000473222 HLA-DMBP28068 263 aa13.1□□□□□ -0.31
NR1H3-218ENST00000473222 PSG9Q00887 426 aa13.1□□□□□ -0.31
NR1H3-218ENST00000473222 DPPA3Q6W0C5 159 aa13.1□□□□□ -0.31
NR1H3-218ENST00000473222 LYPD1Q8N2G4 141 aa13.1□□□□□ -0.31
NR1H3-218ENST00000473222 RNF182Q8N6D2 247 aa13.1□□□□□ -0.31
NR1H3-218ENST00000473222 BLNKQ8WV28 456 aa13.1□□□□□ -0.31
NR1H3-218ENST00000473222 MBD3L1Q8WWY6 194 aa13.1□□□□□ -0.31
NR1H3-218ENST00000473222 CXorf1O96002 111 aa13.09□□□□□ -0.31
NR1H3-218ENST00000473222 ARL14EPLP0DKL9 152 aa13.09□□□□□ -0.31
NR1H3-218ENST00000473222 RAB5CP51148 216 aa13.09□□□□□ -0.31
NR1H3-218ENST00000473222 UBE2L3P68036 154 aaKnown RBP13.09□□□□□ -0.31
NR1H3-218ENST00000473222 FOXI2Q6ZQN5 318 aa13.09□□□□□ -0.31
NR1H3-218ENST00000473222 SAV1Q9H4B6 383 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-218ENST00000473222 NBEAL2Q6ZNJ1 2754 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 LOC102724200A0A096LPH7 203 aaPredicted RBP13.08□□□□□ -0.32
NR1H3-218ENST00000473222 KNCNA6PVL3 124 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 GCHFRP30047 84 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 FHITP49789 147 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 SULT1A2P50226 295 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 PHYHIPLQ96FC7 376 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 B9D2Q9BPU9 175 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 PRELID1Q9Y255 219 aa13.08□□□□□ -0.32
NR1H3-218ENST00000473222 A0A0J9YX75 114 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 H3BMM0 161 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 BOLA2-SMG1P6H3BVE0 249 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 HLA-DRB4P13762 266 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 DEFB1P60022 68 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 EBLN2Q6P2I7 272 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 STHQ8IWL8 128 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 RPUSD4Q96CM3 377 aaKnown RBP13.07□□□□□ -0.32
NR1H3-218ENST00000473222 TMEM167BQ9NRX6 74 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 HLA-DRB4X5D2U9 266 aa13.07□□□□□ -0.32
NR1H3-218ENST00000473222 KIR2DL5BA0A0G2JN68 375 aa13.06□□□□□ -0.32
NR1H3-218ENST00000473222 KIR2DL5BA0A0G2JPC4 375 aa13.06□□□□□ -0.32
NR1H3-218ENST00000473222 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms