RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ARPP19P56211 112 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 TMEM183BQ1AE95 376 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 C5orf17Q8NAS9 161 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 SUMF2Q8NBJ7 301 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 NPBQ8NG41 125 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 OR4K13Q8NH42 304 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 OR4A5Q8NH83 315 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 STAG3L4Q8TBR4 150 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 VSIG2Q96IQ7 327 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 CIB3Q96Q77 187 aaPredicted RBP4.32□□□□□ -1.72
RTF1-203ENST00000473214 TBL1YQ9BQ87 522 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 PYGO2Q9BRQ0 406 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 MIEN1Q9BRT3 115 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 HDHD3Q9BSH5 251 aaPredicted RBP4.32□□□□□ -1.72
RTF1-203ENST00000473214 TAS2R8Q9NYW2 309 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 FUT9Q9Y231 359 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 CCL26Q9Y258 94 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 MOB4Q9Y3A3 225 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 PCM1Q15154 2024 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 MYH11P35749 1972 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 FBN2P35556 2912 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 GOLGA4Q13439 2230 aaKnown RBP4.31□□□□□ -1.72
RTF1-203ENST00000473214 CEP192Q8TEP8 1941 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 CDC42EP2O14613 210 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 IGKV1-5P01602 117 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 IGHV3-23P01764 117 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 CD7P09564 240 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 ZNF823P16415 610 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 CRISP2P16562 243 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 S100A4P26447 101 aaKnown RBP4.31□□□□□ -1.72
RTF1-203ENST00000473214 PSMB8P28062 276 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 PLGLB1Q02325 96 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 ATP5G2Q06055 141 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 BSPH1Q075Z2 132 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 KRTAP27-1Q3LI81 207 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 C9orf106Q8NAJ2 232 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 ZFP62Q8NB50 900 aaPredicted RBP4.31□□□□□ -1.72
RTF1-203ENST00000473214 NAT14Q8WUY8 206 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 SLC25A46Q96AG3 418 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 CAMK2N2Q96S95 79 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 ADAT1Q9BUB4 502 aaKnown RBP4.31□□□□□ -1.72
RTF1-203ENST00000473214 FGF23Q9GZV9 251 aaPredicted RBP4.31□□□□□ -1.72
RTF1-203ENST00000473214 PRO1933Q9H354 126 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 RNF122Q9H9V4 155 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 CSAG2Q9Y5P2 127 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 IER3IP1Q9Y5U9 82 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 NOTCH2Q04721 2471 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 PLXND1Q9Y4D7 1925 aa4.31□□□□□ -1.72
RTF1-203ENST00000473214 FLNCQ14315 2725 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 CABIN1Q9Y6J0 2220 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 DSPPQ9NZW4 1301 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 TRAV27A0A087WT01 109 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 A8MWV9 139 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 C9JCJ5 164 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 KRASP01116 189 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 CXCL1P09341 107 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 SRP14P37108 136 aaKnown RBP4.3□□□□□ -1.72
RTF1-203ENST00000473214 RPL30P62888 115 aaKnown RBP4.3□□□□□ -1.72
RTF1-203ENST00000473214 CATR1Q13166 79 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 AADACL3Q5VUY0 350 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 LYPD2Q6UXB3 125 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 OR8D4Q8NGM9 314 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 TSSK6Q9BXA6 273 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 SPANXDQ9BXN6 97 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
RTF1-203ENST00000473214 OBSL1O75147 1896 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 INS-IGF2F8WCM5 200 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 TMEM256-PLSCR3K7ERE1 68 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 SLC25A14O95258 325 aaPredicted RBP4.29□□□□□ -1.72
RTF1-203ENST00000473214 IGKV1-39P01597 117 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 IGLV2-23P01705 113 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 IGHV3-11P01762 117 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 IGKV1D-39P04432 117 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 CRYBB3P26998 211 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 DIO3P55073 304 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 TAS2R45P59539 299 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 CCL20P78556 96 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 DIAPH2-AS1Q14236 149 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 PYY3Q5JQD4 70 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 FAM182AQ5T1J6 154 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 ZNF329Q86UD4 541 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 RPS19BP1Q86WX3 136 aaKnown RBP4.29□□□□□ -1.72
RTF1-203ENST00000473214 TMEM183AQ8IXX5 376 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 ZNF440Q8IYI8 595 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 SAXO1Q8IYX7 474 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 ORMDL3Q8N138 153 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 OR10AC1Q8NH08 325 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 MAL2Q969L2 176 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 RMI2Q96E14 147 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 DUSP21Q9H596 190 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 TRIP11Q15643 1979 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 MYLKQ15746 1914 aa4.29□□□□□ -1.72
RTF1-203ENST00000473214 IGHV1OR15-9A0A0B4J2B8 117 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 IGKV1-6A0A0C4DH72 117 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 IGKV1-12A0A0C4DH73 117 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 OR2T8A6NH00 312 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 ZNF727A8MUV8 499 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 NDUFB3O43676 98 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 IGKV1D-12P01611 117 aa4.28□□□□□ -1.72
RTF1-203ENST00000473214 TCRAP04437 139 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms