RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 TUBA4BQ9H853 241 aa6.75□□□□□ -1.33
SMC4-214ENST00000472991 TIMM9Q9Y5J7 89 aa6.75□□□□□ -1.33
SMC4-214ENST00000472991 COL7A1Q02388 2944 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 BORCS7-ASMTA0A0B4J1R7 106 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 TRAV5A0A0B4J249 113 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 A8MZ25 164 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
SMC4-214ENST00000472991 CXCL2P19875 107 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 ATP6V0CP27449 155 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 FAM78BQ5VT40 261 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 KCNRGQ8N5I3 272 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 C17orf77Q96MU5 243 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 FAM110AQ9BQ89 295 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 RNF24Q9Y225 148 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 DNAH9Q9NYC9 4486 aa6.74□□□□□ -1.33
SMC4-214ENST00000472991 TGP01266 2768 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 A0A087X0K7 114 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 A0A0D9SG52 128 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 SOCS3O14543 225 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 TAAR5O14804 337 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 C1QBP02746 253 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 SNRPCP09234 159 aaKnown RBP6.73□□□□□ -1.33
SMC4-214ENST00000472991 MEOX2P50222 304 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 CMC4P56277 68 aaPredicted RBP6.73□□□□□ -1.33
SMC4-214ENST00000472991 RAB2AP61019 212 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 PSMG4Q5JS54 123 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 MIR17HGQ75NE6 70 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 BPIFA4PQ86YQ2 179 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 B9D2Q9BPU9 175 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 ARPC5LQ9BPX5 153 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 SPATA25Q9BR10 227 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 PSMG3Q9BT73 122 aaPredicted RBP6.73□□□□□ -1.33
SMC4-214ENST00000472991 MRPL32Q9BYC8 188 aaKnown RBP6.73□□□□□ -1.33
SMC4-214ENST00000472991 SH3BGRL3Q9H299 93 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 SEPSECSQ9HD40 501 aaKnown RBP6.73□□□□□ -1.33
SMC4-214ENST00000472991 CYTL1Q9NRR1 136 aa6.73□□□□□ -1.33
SMC4-214ENST00000472991 KANTRA0A1W2PQU2 76 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 RBMY1BA6NDE4 496 aaKnown RBP6.72□□□□□ -1.33
SMC4-214ENST00000472991 RBMY1EA6NEQ0 496 aaKnown RBP6.72□□□□□ -1.33
SMC4-214ENST00000472991 H3BTX0 84 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 ISLRO14498 428 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 BCL2L11O43521 198 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 EIF3GO75821 320 aaKnown RBP eCLIP6.72□□□□□ -1.338e-13■■■■■ 59.2
SMC4-214ENST00000472991 JTBO76095 146 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 RBMY1DP0C7P1 496 aaKnown RBP6.72□□□□□ -1.33
SMC4-214ENST00000472991 PYYP10082 97 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 M6PRP20645 277 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 ID1P41134 155 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 PSMB3P49720 205 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 SNRPD3P62318 126 aaKnown RBP6.72□□□□□ -1.33
SMC4-214ENST00000472991 ACOT6Q3I5F7 207 aaPredicted RBP6.72□□□□□ -1.33
SMC4-214ENST00000472991 FAM122CQ6P4D5 195 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 TMUB2Q71RG4 321 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 OR2G3Q8NGZ4 309 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 GNPNAT1Q96EK6 184 aaPredicted RBP6.72□□□□□ -1.33
SMC4-214ENST00000472991 C16orf92Q96LL3 132 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 LINC00052Q96N35 136 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 ASCL2Q99929 193 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 SLC25A2Q9BXI2 301 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 FUT9Q9Y231 359 aa6.72□□□□□ -1.33
SMC4-214ENST00000472991 LOC102724200A0A096LPH7 203 aaPredicted RBP6.71□□□□□ -1.34
SMC4-214ENST00000472991 TRAV8-2A0A0B4J237 113 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 KNCNA6PVL3 124 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 H3BQ15 152 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 SLC17A3O00476 420 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 PFDN1O60925 122 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 IGLC2P0DOY2 106 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 RPL35AP18077 110 aaKnown RBP6.71□□□□□ -1.34
SMC4-214ENST00000472991 DEFB1P60022 68 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 RHOBP62745 196 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 SAMD13Q5VXD3 122 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 IGFL4Q6B9Z1 124 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 LCN15Q6UWW0 184 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 LINC00322Q6ZN03 302 aaPredicted RBP6.71□□□□□ -1.34
SMC4-214ENST00000472991 SBSPONQ8IVN8 264 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 RNF182Q8N6D2 247 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 OR10G4Q8NGN3 311 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 OR10G9Q8NGN4 311 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 OR10G7Q8NGN6 311 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 LRRC20Q8TCA0 184 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 FAM167A-AS1Q96KT0 104 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 HYLS1Q96M11 299 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 ZNF471Q9BX82 626 aaPredicted RBP6.71□□□□□ -1.34
SMC4-214ENST00000472991 TMEM14CQ9P0S9 112 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 TENM3Q9P273 2699 aa6.71□□□□□ -1.34
SMC4-214ENST00000472991 OR7C2O60412 319 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 OR10J4P0C629 311 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 HLA-DMBP28068 263 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 CDC34P49427 236 aaPredicted RBP6.7□□□□□ -1.34
SMC4-214ENST00000472991 SERF2P84101 59 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 HAGHQ16775 308 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 LGALSLQ3ZCW2 172 aaPredicted RBP6.7□□□□□ -1.34
SMC4-214ENST00000472991 ZFP69Q49AA0 526 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 KHDC3LQ587J8 217 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 TMEM41BQ5BJD5 291 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 ACTL10Q5JWF8 245 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 STHQ8IWL8 128 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 SLC50A1Q9BRV3 221 aa6.7□□□□□ -1.34
SMC4-214ENST00000472991 HRH4Q9H3N8 390 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms