RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 BPIFCQ8NFQ6 507 aa12.87□□□□□ -0.35
SORT1-203ENST00000471996 RAB2BQ8WUD1 216 aa12.87□□□□□ -0.35
SORT1-203ENST00000471996 IL22RA2Q969J5 263 aa12.87□□□□□ -0.35
SORT1-203ENST00000471996 IGLV5-52A0A0A0MRZ9 124 aa12.86□□□□□ -0.35
SORT1-203ENST00000471996 RAB3DO95716 219 aa12.86□□□□□ -0.35
SORT1-203ENST00000471996 PLA2G1BP04054 148 aaKnown RBP12.86□□□□□ -0.35
SORT1-203ENST00000471996 PRB4P10163 310 aaPredicted RBP12.86□□□□□ -0.35
SORT1-203ENST00000471996 GATA2P23769 480 aaPredicted RBP12.86□□□□□ -0.35
SORT1-203ENST00000471996 RAB11AP62491 216 aa12.86□□□□□ -0.35
SORT1-203ENST00000471996 SSBP1Q04837 148 aaKnown RBP12.86□□□□□ -0.35
SORT1-203ENST00000471996 DAZ2Q13117 558 aaKnown RBP12.86□□□□□ -0.35
SORT1-203ENST00000471996 SMCO1Q147U7 214 aa12.86□□□□□ -0.35
SORT1-203ENST00000471996 TMEM182Q6ZP80 229 aaPredicted RBP12.86□□□□□ -0.35
SORT1-203ENST00000471996 Q6ZTI0 123 aa12.86□□□□□ -0.35
SORT1-203ENST00000471996 DEFB104AQ8WTQ1 72 aa12.86□□□□□ -0.35
SORT1-203ENST00000471996 RPL7P18124 248 aaKnown RBP12.85□□□□□ -0.35
SORT1-203ENST00000471996 TMBIM6P55061 237 aa12.85□□□□□ -0.35
SORT1-203ENST00000471996 TMEM229BQ8NBD8 167 aa12.85□□□□□ -0.35
SORT1-203ENST00000471996 RPUSD4Q96CM3 377 aaKnown RBP12.85□□□□□ -0.35
SORT1-203ENST00000471996 MSRB1Q9NZV6 116 aa12.85□□□□□ -0.35
SORT1-203ENST00000471996 PLA2G2DQ9UNK4 145 aa12.85□□□□□ -0.35
SORT1-203ENST00000471996 FAT3Q8TDW7 4589 aa12.85□□□□□ -0.35
SORT1-203ENST00000471996 NPIPB6E9PJ23 425 aa12.84□□□□□ -0.35
SORT1-203ENST00000471996 H3BRN7 92 aa12.84□□□□□ -0.35
SORT1-203ENST00000471996 TAS2R19P59542 299 aa12.84□□□□□ -0.35
SORT1-203ENST00000471996 SURF2Q15527 256 aaPredicted RBP12.84□□□□□ -0.35
SORT1-203ENST00000471996 GFI1BQ5VTD9 330 aa12.84□□□□□ -0.35
SORT1-203ENST00000471996 STEAP1BQ6NZ63 245 aa12.84□□□□□ -0.35
SORT1-203ENST00000471996 CLVS1Q8IUQ0 354 aaPredicted RBP12.84□□□□□ -0.35
SORT1-203ENST00000471996 OR1S1Q8NH92 325 aa12.84□□□□□ -0.35
SORT1-203ENST00000471996 FAM30AQ9NZY2 134 aa12.84□□□□□ -0.35
SORT1-203ENST00000471996 ICOSQ9Y6W8 199 aa12.84□□□□□ -0.35
SORT1-203ENST00000471996 LY96Q9Y6Y9 160 aa12.84□□□□□ -0.35
SORT1-203ENST00000471996 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
SORT1-203ENST00000471996 RGS5O15539 181 aa12.83□□□□□ -0.36
SORT1-203ENST00000471996 LRRC20Q8TCA0 184 aa12.83□□□□□ -0.36
SORT1-203ENST00000471996 NTN5Q8WTR8 489 aaPredicted RBP12.83□□□□□ -0.36
SORT1-203ENST00000471996 SHANK2-AS3Q9BTD1 123 aa12.83□□□□□ -0.36
SORT1-203ENST00000471996 PARD6GQ9BYG4 376 aaPredicted RBP12.83□□□□□ -0.36
SORT1-203ENST00000471996 PRR13Q9NZ81 148 aa12.83□□□□□ -0.36
SORT1-203ENST00000471996 GPR132Q9UNW8 380 aa12.83□□□□□ -0.36
SORT1-203ENST00000471996 A0A087X0K7 114 aa12.82□□□□□ -0.36
SORT1-203ENST00000471996 A0A0B4J2A0 478 aa12.82□□□□□ -0.36
SORT1-203ENST00000471996 K7EP13 123 aa12.82□□□□□ -0.36
SORT1-203ENST00000471996 SPCS2Q15005 226 aa12.82□□□□□ -0.36
SORT1-203ENST00000471996 LYPD5Q6UWN5 251 aa12.82□□□□□ -0.36
SORT1-203ENST00000471996 LYZL2Q7Z4W2 148 aa12.82□□□□□ -0.36
SORT1-203ENST00000471996 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
SORT1-203ENST00000471996 MIXL1Q9H2W2 232 aa12.82□□□□□ -0.36
SORT1-203ENST00000471996 CCDC59Q9P031 241 aaKnown RBP12.82□□□□□ -0.36
SORT1-203ENST00000471996 SHPKQ9UHJ6 478 aa12.82□□□□□ -0.36
SORT1-203ENST00000471996 PAIP2BQ9ULR5 123 aaKnown RBP12.82□□□□□ -0.36
SORT1-203ENST00000471996 CTDSP2O14595 271 aa12.81□□□□□ -0.36
SORT1-203ENST00000471996 CTDSPLO15194 276 aa12.81□□□□□ -0.36
SORT1-203ENST00000471996 PAX4O43316 350 aa12.81□□□□□ -0.36
SORT1-203ENST00000471996 NOL3O60936 208 aaKnown RBP12.81□□□□□ -0.36
SORT1-203ENST00000471996 ZNF324O75467 553 aaPredicted RBP12.81□□□□□ -0.36
SORT1-203ENST00000471996 FAAP20Q6NZ36 180 aa12.81□□□□□ -0.36
SORT1-203ENST00000471996 DYNC2LI1Q8TCX1 351 aa12.81□□□□□ -0.36
SORT1-203ENST00000471996 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
SORT1-203ENST00000471996 PRSS46E5RG02 174 aa12.8□□□□□ -0.36
SORT1-203ENST00000471996 IAPPP10997 89 aa12.8□□□□□ -0.36
SORT1-203ENST00000471996 AKR1C4P17516 323 aa12.8□□□□□ -0.36
SORT1-203ENST00000471996 RAP2BP61225 183 aa12.8□□□□□ -0.36
SORT1-203ENST00000471996 HIGD1AQ9Y241 93 aa12.8□□□□□ -0.36
SORT1-203ENST00000471996 CCDC190Q86UF4 302 aa12.79□□□□□ -0.36
SORT1-203ENST00000471996 LINC00528Q8N1L1 170 aa12.79□□□□□ -0.36
SORT1-203ENST00000471996 DIRAS2Q96HU8 199 aa12.79□□□□□ -0.36
SORT1-203ENST00000471996 PYGO2Q9BRQ0 406 aa12.79□□□□□ -0.36
SORT1-203ENST00000471996 FUT9Q9Y231 359 aa12.79□□□□□ -0.36
SORT1-203ENST00000471996 LRCOL1A6NCL2 159 aa12.78□□□□□ -0.36
SORT1-203ENST00000471996 C1QBP02746 253 aa12.78□□□□□ -0.36
SORT1-203ENST00000471996 EVI2AP22794 236 aa12.78□□□□□ -0.36
SORT1-203ENST00000471996 SMIM4Q8WVI0 70 aa12.78□□□□□ -0.36
SORT1-203ENST00000471996 GSN-AS1Q9NRJ2 163 aa12.78□□□□□ -0.36
SORT1-203ENST00000471996 TRGV1A0A0A0MS02 117 aa12.77□□□□□ -0.37
SORT1-203ENST00000471996 TRAV12-3A0A0B4J271 114 aa12.77□□□□□ -0.37
SORT1-203ENST00000471996 DISC1C4P0D8 188 aa12.77□□□□□ -0.37
SORT1-203ENST00000471996 PITX3O75364 302 aa12.77□□□□□ -0.37
SORT1-203ENST00000471996 HYPMO75409 117 aa12.77□□□□□ -0.37
SORT1-203ENST00000471996 AKR1C1Q04828 323 aa12.77□□□□□ -0.37
SORT1-203ENST00000471996 IL18Q14116 193 aa12.77□□□□□ -0.37
SORT1-203ENST00000471996 RSL24D1Q9UHA3 163 aaKnown RBP12.77□□□□□ -0.37
SORT1-203ENST00000471996 J3KRW8 73 aa12.76□□□□□ -0.37
SORT1-203ENST00000471996 PLP1P60201 277 aa12.76□□□□□ -0.37
SORT1-203ENST00000471996 MRPL23Q16540 153 aaKnown RBP12.76□□□□□ -0.37
SORT1-203ENST00000471996 CYP2G1PQ6ZSU1 146 aa12.76□□□□□ -0.37
SORT1-203ENST00000471996 ACOT7LQ6ZUV0 252 aa12.76□□□□□ -0.37
SORT1-203ENST00000471996 NEGR1Q7Z3B1 354 aa12.76□□□□□ -0.37
SORT1-203ENST00000471996 WFDC10BQ8IUB3 73 aa12.76□□□□□ -0.37
SORT1-203ENST00000471996 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
SORT1-203ENST00000471996 ZNF680Q8NEM1 530 aa12.76□□□□□ -0.37
SORT1-203ENST00000471996 ZNF331Q9NQX6 463 aaPredicted RBP12.76□□□□□ -0.37
SORT1-203ENST00000471996 PRO0255Q9UI72 69 aa12.76□□□□□ -0.37
SORT1-203ENST00000471996 PMS2P5A8MQ11 134 aa12.75□□□□□ -0.37
SORT1-203ENST00000471996 PRAC2D3DTV9 90 aa12.75□□□□□ -0.37
SORT1-203ENST00000471996 H3BMQ9 156 aa12.75□□□□□ -0.37
SORT1-203ENST00000471996 MRPS12O15235 138 aaKnown RBP12.75□□□□□ -0.37
SORT1-203ENST00000471996 OXTP01178 125 aa12.75□□□□□ -0.37
SORT1-203ENST00000471996 IL5P05113 134 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms