RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 IGLV1-51P01701 117 aa14.34□□□□□ -0.11
SNX4-203ENST00000471751 CD33P20138 364 aa14.34□□□□□ -0.11
SNX4-203ENST00000471751 TCEAL7Q9BRU2 100 aa14.34□□□□□ -0.11
SNX4-203ENST00000471751 SMDT1Q9H4I9 107 aa14.34□□□□□ -0.11
SNX4-203ENST00000471751 SMAD5-AS1Q9Y6J3 95 aa14.34□□□□□ -0.11
SNX4-203ENST00000471751 RBPMS2Q6ZRY4 209 aaKnown RBP14.33□□□□□ -0.12
SNX4-203ENST00000471751 SPAG8Q99932 426 aaPredicted RBP14.33□□□□□ -0.12
SNX4-203ENST00000471751 ZNF586Q9NXT0 402 aa14.33□□□□□ -0.12
SNX4-203ENST00000471751 IGHV3OR16-13A0A075B7E8 117 aa14.32□□□□□ -0.12
SNX4-203ENST00000471751 IGHV3-49A0A0A0MS15 119 aa14.32□□□□□ -0.12
SNX4-203ENST00000471751 IGHV3-74A0A0B4J1X5 117 aa14.32□□□□□ -0.12
SNX4-203ENST00000471751 HMGB3O15347 200 aaKnown RBP14.32□□□□□ -0.12
SNX4-203ENST00000471751 SAP30O75446 220 aa14.32□□□□□ -0.12
SNX4-203ENST00000471751 PYYP10082 97 aa14.32□□□□□ -0.12
SNX4-203ENST00000471751 FGF8P55075 233 aaPredicted RBP14.32□□□□□ -0.12
SNX4-203ENST00000471751 CMC4P56277 68 aaPredicted RBP14.32□□□□□ -0.12
SNX4-203ENST00000471751 PRR31Q5SQ13 230 aa14.32□□□□□ -0.12
SNX4-203ENST00000471751 ZMAT5Q9UDW3 170 aaKnown RBP14.32□□□□□ -0.12
SNX4-203ENST00000471751 PRELID1Q9Y255 219 aa14.32□□□□□ -0.12
SNX4-203ENST00000471751 IGHV3-66A0A0C4DH42 116 aa14.31□□□□□ -0.12
SNX4-203ENST00000471751 H3BQ15 152 aa14.31□□□□□ -0.12
SNX4-203ENST00000471751 ISLRO14498 428 aa14.31□□□□□ -0.12
SNX4-203ENST00000471751 LCN12Q6JVE5 192 aa14.31□□□□□ -0.12
SNX4-203ENST00000471751 OR10J4P0C629 311 aa14.3□□□□□ -0.12
SNX4-203ENST00000471751 ID1P41134 155 aa14.3□□□□□ -0.12
SNX4-203ENST00000471751 RPL11P62913 178 aaKnown RBP14.3□□□□□ -0.12
SNX4-203ENST00000471751 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.3□□□□□ -0.12
SNX4-203ENST00000471751 MRPL53Q96EL3 112 aaKnown RBP14.3□□□□□ -0.12
SNX4-203ENST00000471751 AAMDCQ9H7C9 122 aa14.3□□□□□ -0.12
SNX4-203ENST00000471751 ZNF331Q9NQX6 463 aaPredicted RBP14.3□□□□□ -0.12
SNX4-203ENST00000471751 RAB19A4D1S5 217 aa14.29□□□□□ -0.12
SNX4-203ENST00000471751 CD300EQ496F6 205 aaPredicted RBP14.29□□□□□ -0.12
SNX4-203ENST00000471751 RXFP4Q8TDU9 374 aa14.29□□□□□ -0.12
SNX4-203ENST00000471751 DCANP1Q8TF63 244 aa14.29□□□□□ -0.12
SNX4-203ENST00000471751 FAM210AQ96ND0 272 aa14.29□□□□□ -0.12
SNX4-203ENST00000471751 FAM110AQ9BQ89 295 aa14.29□□□□□ -0.12
SNX4-203ENST00000471751 MS4A6AQ9H2W1 248 aa14.29□□□□□ -0.12
SNX4-203ENST00000471751 OTORQ9NRC9 128 aa14.29□□□□□ -0.12
SNX4-203ENST00000471751 LINC00862A6NCI5 91 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 OR4C46A6NHA9 309 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 DNASE2O00115 360 aaPredicted RBP14.28□□□□□ -0.12
SNX4-203ENST00000471751 NDUFB4O95168 129 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 EDN2P20800 178 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 CCL20P78556 96 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 IQCF2Q8IXL9 164 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 C17orf77Q96MU5 243 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 TMPRSS5Q9H3S3 457 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 VAX2Q9UIW0 290 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 NOTCH3Q9UM47 2321 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 SORL1Q92673 2214 aa14.28□□□□□ -0.12
SNX4-203ENST00000471751 RBFOX3A6NFN3 312 aa14.27□□□□□ -0.12
SNX4-203ENST00000471751 FAM74A7A6NL05 159 aa14.27□□□□□ -0.12
SNX4-203ENST00000471751 K7EQG2 157 aa14.27□□□□□ -0.12
SNX4-203ENST00000471751 SOCS3O14543 225 aa14.27□□□□□ -0.12
SNX4-203ENST00000471751 BCL2P10415 239 aa14.27□□□□□ -0.12
SNX4-203ENST00000471751 SNRPD3P62318 126 aaKnown RBP14.27□□□□□ -0.12
SNX4-203ENST00000471751 TMEM61Q8N0U2 210 aa14.27□□□□□ -0.12
SNX4-203ENST00000471751 GNG13Q9P2W3 67 aa14.27□□□□□ -0.12
SNX4-203ENST00000471751 NBEAL1Q6ZS30 2694 aa14.26□□□□□ -0.13
SNX4-203ENST00000471751 SERTM2A0A1B0GWG4 89 aa14.26□□□□□ -0.13
SNX4-203ENST00000471751 NDUFA5Q16718 116 aa14.26□□□□□ -0.13
SNX4-203ENST00000471751 EIF4E3Q8N5X7 224 aaKnown RBP14.26□□□□□ -0.13
SNX4-203ENST00000471751 BLNKQ8WV28 456 aa14.26□□□□□ -0.13
SNX4-203ENST00000471751 C16orf92Q96LL3 132 aa14.26□□□□□ -0.13
SNX4-203ENST00000471751 F6UZH7 168 aa14.25□□□□□ -0.13
SNX4-203ENST00000471751 PDE6DO43924 150 aa14.25□□□□□ -0.13
SNX4-203ENST00000471751 EIF3GO75821 320 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNX4-203ENST00000471751 RANP62826 216 aaKnown RBP14.25□□□□□ -0.13
SNX4-203ENST00000471751 MEF2BQ02080 365 aaPredicted RBP14.25□□□□□ -0.13
SNX4-203ENST00000471751 PEA15Q15121 130 aa14.25□□□□□ -0.13
SNX4-203ENST00000471751 ZNF506Q5JVG8 444 aa14.25□□□□□ -0.13
SNX4-203ENST00000471751 UQCC3Q6UW78 93 aa14.25□□□□□ -0.13
SNX4-203ENST00000471751 CCDC28AQ8IWP9 274 aa14.25□□□□□ -0.13
SNX4-203ENST00000471751 HIST1H2BAQ96A08 127 aa14.25□□□□□ -0.13
SNX4-203ENST00000471751 Q9H3A6 140 aa14.25□□□□□ -0.13
SNX4-203ENST00000471751 FBLL1A6NHQ2 334 aaKnown RBP14.24□□□□□ -0.13
SNX4-203ENST00000471751 PAGE4O60829 102 aa14.24□□□□□ -0.13
SNX4-203ENST00000471751 CSN1S1P47710 185 aa14.24□□□□□ -0.13
SNX4-203ENST00000471751 C5orf17Q8NAS9 161 aa14.24□□□□□ -0.13
SNX4-203ENST00000471751 RPUSD4Q96CM3 377 aaKnown RBP14.24□□□□□ -0.13
SNX4-203ENST00000471751 ZNF256Q9Y2P7 627 aaPredicted RBP14.24□□□□□ -0.13
SNX4-203ENST00000471751 LOC102723971A0A1B0GUV8 181 aa14.23□□□□□ -0.13
SNX4-203ENST00000471751 A0A1B0GV50 99 aa14.23□□□□□ -0.13
SNX4-203ENST00000471751 PGPA6NDG6 321 aa14.23□□□□□ -0.13
SNX4-203ENST00000471751 SUMO1P63165 101 aaKnown RBP14.23□□□□□ -0.13
SNX4-203ENST00000471751 PSG3Q16557 428 aa14.23□□□□□ -0.13
SNX4-203ENST00000471751 CMTM2Q8TAZ6 248 aa14.23□□□□□ -0.13
SNX4-203ENST00000471751 PCNPQ8WW12 178 aaKnown RBP14.23□□□□□ -0.13
SNX4-203ENST00000471751 C11orf94C9JXX5 98 aa14.22□□□□□ -0.13
SNX4-203ENST00000471751 TMEM250H0YL14 139 aa14.22□□□□□ -0.13
SNX4-203ENST00000471751 BEAN1Q3B7T3 259 aa14.22□□□□□ -0.13
SNX4-203ENST00000471751 CST9LP1Q5W188 147 aa14.22□□□□□ -0.13
SNX4-203ENST00000471751 EIF5A2Q9GZV4 153 aaKnown RBP14.22□□□□□ -0.13
SNX4-203ENST00000471751 YTHDF2Q9Y5A9 579 aaKnown RBP14.22□□□□□ -0.13
SNX4-203ENST00000471751 TRAV8-2A0A0B4J237 113 aa14.21□□□□□ -0.13
SNX4-203ENST00000471751 RBAKDNA6NC62 111 aa14.21□□□□□ -0.13
SNX4-203ENST00000471751 SLC17A3O00476 420 aa14.21□□□□□ -0.13
SNX4-203ENST00000471751 SLC25A5P05141 298 aaKnown RBP14.21□□□□□ -0.13
SNX4-203ENST00000471751 ICAM4Q14773 271 aa14.21□□□□□ -0.13
SNX4-203ENST00000471751 EPDR1Q9UM22 224 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms