RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 UNQ9165/PRO28630Q6UXU0 137 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 LINC00305Q7Z4B0 112 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 WFDC3Q8IUB2 231 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 SHANK2-AS3Q9BTD1 123 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 SLC25A39Q9BZJ4 359 aaPredicted RBP6.74□□□□□ -1.33
SF3A1-206ENST00000471037 SLC25A22Q9H936 323 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 SEPSECSQ9HD40 501 aaKnown RBP6.74□□□□□ -1.33
SF3A1-206ENST00000471037 TP53TG1Q9Y2A0 90 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 TRAV1-1A0A0B4J248 108 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 MAP1LC3B2A6NCE7 125 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 ZNF98A6NK75 572 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 HBE1P02100 147 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 H2AFB1P0C5Y9 115 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 C8orf88P0DMB2 117 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 ATF4P18848 351 aaPredicted RBP6.73□□□□□ -1.33
SF3A1-206ENST00000471037 FHITP49789 147 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 ZNF726P1Q15940 193 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 KHDC3LQ587J8 217 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 C1orf194Q5T5A4 169 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 PQLC2Q6ZP29 291 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 MIR17HGQ75NE6 70 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 STXBP6Q8NFX7 210 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 MBD3L1Q8WWY6 194 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 RAB24Q969Q5 203 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 MARC2Q969Z3 335 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 UHRF2Q96PU4 802 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 MAP1LC3BQ9GZQ8 125 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 TMEM231Q9H6L2 316 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 MLXQ9UH92 298 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 U3KQE9 123 aa6.73□□□□□ -1.33
SF3A1-206ENST00000471037 IGHV3OR16-8A0A075B7F1 116 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 TRAV25A0A0B4J276 109 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 IGHV7-4-1A0A0J9YVY3 117 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 CXorf65A6NEN9 183 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 ZNF207O43670 478 aaKnown RBP6.72□□□□□ -1.33
SF3A1-206ENST00000471037 BUB3O43684 328 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 CXorf1O96002 111 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 NMBP08949 121 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 STAG3L2P0CL84 134 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 STAG3L3P0CL85 134 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 PMS2P11Q13670 270 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 TM4SF20Q53R12 229 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 CLLU1Q5K131 121 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 SPATA31B1PQ5VZV4 182 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 CEMP1Q6PRD7 247 aaPredicted RBP6.72□□□□□ -1.33
SF3A1-206ENST00000471037 Q6ZWC4 215 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 SFT2D1Q8WV19 159 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 GRAMD2BQ96HH9 432 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 FAM167A-AS1Q96KT0 104 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 GPR82Q96P67 336 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 SCRT1Q9BWW7 348 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 HERC2O95714 4834 aa6.72□□□□□ -1.33
SF3A1-206ENST00000471037 A0A0J9YWU9 116 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 ARL14EPLP0DKL9 152 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 RPL7P18124 248 aaKnown RBP6.71□□□□□ -1.34
SF3A1-206ENST00000471037 MORN5Q5VZ52 161 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 LCN15Q6UWW0 184 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 SSX7Q7RTT5 188 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 BPIFA4PQ86YQ2 179 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 OR8I2Q8N0Y5 310 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 LYPD6BQ8NI32 183 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 PAXXQ9BUH6 204 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 SLC25A2Q9BXI2 301 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 TMEM14CQ9P0S9 112 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 SMPXQ9UHP9 88 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 KMT2AQ03164 3969 aa6.71□□□□□ -1.34
SF3A1-206ENST00000471037 TRAV5A0A0B4J249 113 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 UBE2CO00762 179 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 CHEK1O14757 476 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 HMGB3O15347 200 aaKnown RBP6.7□□□□□ -1.34
SF3A1-206ENST00000471037 SPRY2O43597 315 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 OR7C2O60412 319 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 APOHP02749 345 aaPredicted RBP6.7□□□□□ -1.34
SF3A1-206ENST00000471037 CD5P06127 495 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 GCHFRP30047 84 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 GALR1P47211 349 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 PSMB3P49720 205 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 PPT1P50897 306 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 APOC4P55056 127 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 FGF8P55075 233 aaPredicted RBP6.7□□□□□ -1.34
SF3A1-206ENST00000471037 LEMD1Q68G75 181 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 C16orf54Q6UWD8 224 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 GLMPQ8WWB7 406 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 SPAG8Q99932 426 aaPredicted RBP6.7□□□□□ -1.34
SF3A1-206ENST00000471037 RHPN1-AS1Q9BWJ2 59 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 OR51M1Q9H341 326 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 HRH4Q9H3N8 390 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 TMEM167BQ9NRX6 74 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 KLK5Q9Y337 293 aaPredicted RBP6.7□□□□□ -1.34
SF3A1-206ENST00000471037 SELENOKQ9Y6D0 94 aa6.7□□□□□ -1.34
SF3A1-206ENST00000471037 IGHV3-49A0A0A0MS15 119 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 IGHV3-66A0A0C4DH42 116 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 KIR2DL5BA0A0G2JN68 375 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 KIR2DL5BA0A0G2JPC4 375 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 HELTA6NFD8 242 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 MRPS12O15235 138 aaKnown RBP6.69□□□□□ -1.34
SF3A1-206ENST00000471037 HIST1H1EP10412 219 aaKnown RBP6.69□□□□□ -1.34
SF3A1-206ENST00000471037 TAGLN2P37802 199 aaKnown RBP6.69□□□□□ -1.34
SF3A1-206ENST00000471037 MEOX2P50222 304 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms