RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SPANXN5Q5MJ07 72 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 CTRB2Q6GPI1 263 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 THOC7Q6I9Y2 204 aaKnown RBP2.74□□□□□ -1.97
COL9A1-206ENST00000470652 OR8G2PQ6IF36 304 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 SLC25A24Q6NUK1 477 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 ZNF562Q6V9R5 426 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 Q8N2B8 174 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM86BQ8N661 226 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 C14orf178Q8N769 122 aaPredicted RBP2.74□□□□□ -1.97
COL9A1-206ENST00000470652 UBAC2Q8NBM4 344 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 OR5AU1Q8NGC0 362 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 OR1L8Q8NGR8 309 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 SGMS2Q8NHU3 365 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 DTD1Q8TEA8 209 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 DEDD2Q8WXF8 326 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM37Q8WXS4 190 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 DLX4Q92988 240 aaPredicted RBP2.74□□□□□ -1.97
COL9A1-206ENST00000470652 IL22RA2Q969J5 263 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 C2orf50Q96LR7 162 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 PDCD10Q9BUL8 212 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 COMMD5Q9GZQ3 224 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 RAB18Q9NP72 206 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.74□□□□□ -1.97
COL9A1-206ENST00000470652 PSENENQ9NZ42 101 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 PRNDQ9UKY0 176 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 IGKV1D-37A0A075B6S9 117 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 IGKV1OR2-108A0A075B7D4 117 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 IGHV3OR16-13A0A075B7E8 117 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 IGHV3-74A0A0B4J1X5 117 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 IGHV3-66A0A0C4DH42 116 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 CLPSL1A2RUU4 121 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 RNF222A6NCQ9 220 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 OR2T8A6NH00 312 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 I3L2K1 104 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 ARPC5O15511 151 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 SYNGR2O43760 224 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 DEDDO75618 318 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 NDUFA7O95182 113 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 MT-CO2P00403 227 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 IFNA10P01566 189 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 IFNA21P01568 189 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 HSPB1P04792 205 aaKnown RBP2.73□□□□□ -1.97
COL9A1-206ENST00000470652 IGF1P05019 195 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 CRYBA1P05813 215 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 PSMB8P28062 276 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 CAV2P51636 162 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 KRTAP10-1P60331 282 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 SPCS3P61009 180 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 RUNX1Q01196 453 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 ZNF90Q03938 601 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 SLC38A11Q08AI6 406 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 OR2F1Q13607 317 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 CLINT1Q14677 625 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 BSXQ3C1V8 233 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 TIGITQ495A1 244 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 GCSAMLQ5JQS6 135 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 LAMTOR1Q6IAA8 161 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 CLEC19AQ6UXS0 136 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 UNQ9165/PRO28630Q6UXU0 137 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 ACOT7LQ6ZUV0 252 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 CEND1Q8N111 149 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 OR2T35Q8NGX2 323 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 OR4A5Q8NH83 315 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 CD300LFQ8TDQ1 290 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 CACNG8Q8WXS5 425 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 DCUN1D4Q92564 292 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 ACY3Q96HD9 319 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 RNF5Q99942 180 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 CHRDL1Q9BU40 450 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 SH3BGRL3Q9H299 93 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 C16orf95Q9H693 158 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 PITPNC1Q9UKF7 332 aa2.73□□□□□ -1.97
COL9A1-206ENST00000470652 F11RQ9Y624 299 aaKnown RBP2.73□□□□□ -1.97
COL9A1-206ENST00000470652 PRKDCP78527 4128 aaKnown RBP2.73□□□□□ -1.97
COL9A1-206ENST00000470652 TRBV9A0A0B4J1U6 114 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 TRBV7-9A0A0J9YWB2 115 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 UBE2L5PA0A1B0GUS4 154 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 DUXBA0A1W2PPF3 345 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 TCRBV4S1A1TA0A5B7 111 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 SMCO3A2RU48 225 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM89A2RUT3 159 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 IGHG4P01861 327 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 IFNA4P05014 189 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 CRYGCP07315 174 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 GIPP09681 153 aaPredicted RBP2.72□□□□□ -1.97
COL9A1-206ENST00000470652 NPY1RP25929 384 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 OPRK1P41145 380 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 EIF2B2P49770 351 aaKnown RBP2.72□□□□□ -1.97
COL9A1-206ENST00000470652 RAB9AP51151 201 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 RND2P52198 227 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 EWSR1Q01844 656 aaKnown RBP eCLIP2.72□□□□□ -1.97
COL9A1-206ENST00000470652 EXOSC2Q13868 293 aaKnown RBP2.72□□□□□ -1.97
COL9A1-206ENST00000470652 ZNF674Q2M3X9 581 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 LGALSLQ3ZCW2 172 aaPredicted RBP2.72□□□□□ -1.97
COL9A1-206ENST00000470652 PRSS54Q6PEW0 395 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM14EPQ6UXP3 125 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 SLC16A13Q7RTY0 426 aa2.72□□□□□ -1.97
COL9A1-206ENST00000470652 AKAP14Q86UN6 197 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms